RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 LOXP28300 417 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 RPL29P47914 159 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 DLX6P56179 175 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 CD81P60033 236 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 TMEM155Q4W5P6 130 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 C2orf83Q53S99 150 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 LYPD2Q6UXB3 125 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 MUC15Q8N387 334 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 OR10X1Q8NGY0 326 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 NANPQ8TBE9 248 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 H1FXQ92522 213 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 NEUROG1Q92886 237 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 FLYWCH2Q96CP2 140 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 CTSZQ9UBR2 303 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 NAT8Q9UHE5 227 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 TEX50A0A1B0GTY4 177 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 CA2P00918 260 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 SAA1P0DJI8 122 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 USF1P22415 310 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 IL3RAP26951 378 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 PPOXP50336 477 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 TMEM241Q24JQ0 296 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 BSXQ3C1V8 233 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 ZNF672Q499Z4 452 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 CYP2G1PQ6ZSU1 146 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 OR1L8Q8NGR8 309 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 LINC01560Q8TB33 94 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 MGST2Q99735 147 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 SSX3Q99909 188 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 GGTLC1Q9BX51 225 aa5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 RALYQ9UKM9 306 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-209ENST00000564678 PIEZO2Q9H5I5 2752 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 A0A1W2PN81 502 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 B5MCH6 92 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 CLDN34H7C241 214 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 TGOLN2O43493 480 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 PDE6DO43924 150 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 RBP4P02753 201 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 STAG3L2P0CL84 134 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 IGHV1-8P0DP01 117 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 CHRNA7P36544 502 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 LGALS7P47929 136 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 CNN1P51911 297 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 RND2P52198 227 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 ERHP84090 104 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 HNF4GQ14541 408 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 TMEM144Q7Z5S9 345 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 TMEM167AQ8TBQ9 72 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 CACNG8Q8WXS5 425 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 DAZAP1Q96EP5 407 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 HARBI1Q96MB7 349 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 NEU1Q99519 415 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 NABP2Q9BQ15 211 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 SMIM7Q9BQ49 75 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 TMEM204Q9BSN7 226 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 C19orf24Q9BVV8 132 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 MRPL20Q9BYC9 149 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 SIRPDQ9H106 197 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 SAV1Q9H4B6 383 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 NDUFA4L2Q9NRX3 87 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 PXMP4Q9Y6I8 212 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 PIEZO1Q92508 2521 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 TNCP24821 2201 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 YIF1AO95070 293 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 VENTXO95231 258 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 CXorf1O96002 111 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 S100A6P06703 90 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 BMI1P35226 326 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 ERVFRD-1P60508 538 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 B2MP61769 119 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 RPL8P62917 257 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 ELOBQ15370 118 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 CD300EQ496F6 205 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 TGIF2LXQ8IUE1 241 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 C11orf42Q8N5U0 333 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 COMMD5Q9GZQ3 224 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 TMEM133Q9H2Q1 129 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 WASHC3Q9Y3C0 194 aa5.87□□□□□ -1.47
HERPUD1-209ENST00000564678 PKDREJQ9NTG1 2253 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 F6UZH7 168 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 HMGB3O15347 200 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 PLAUP00749 431 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 GPX4P36969 197 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 RHOBP62745 196 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 MIC13Q5XKP0 118 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 ZNF841Q6ZN19 808 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 PNKDQ8N490 385 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 OR4F5Q8NH21 305 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 TMEM68Q96MH6 324 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 OR4F4Q96R69 305 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 YAE1D1Q9NRH1 226 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 TLN1Q9Y490 2541 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 C11orf94C9JXX5 98 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 CLN5O75503 358 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 MT-CO2P00403 227 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 IGHV2-70P01814 119 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 RNASE2P10153 161 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 COL8A2P25067 703 aa5.86□□□□□ -1.47
HERPUD1-209ENST00000564678 SUB1P53999 127 aaKnown RBP eCLIP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms