RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 OR2T8A6NH00 312 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 CENPXA8MT69 81 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 K7EIM0 57 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 IGLV1-51P01701 117 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 GP9P14770 177 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 VAMP1P23763 118 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 SUB1P53999 127 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDH1-206ENST00000564676 SPCS3P61009 180 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 SUPT4H1P63272 117 aaKnown RBP7.57□□□□□ -1.2
CDH1-206ENST00000564676 SRPXP78539 464 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 Q56UQ5 140 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 TMEM128Q5BJH2 165 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 UBAC2Q8NBM4 344 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 ZNF114Q8NC26 417 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 DYNLRB2Q8TF09 96 aa7.57□□□□□ -1.2
CDH1-206ENST00000564676 PINX1Q96BK5 328 aaKnown RBP7.57□□□□□ -1.2
CDH1-206ENST00000564676 SDHCQ99643 169 aaPredicted RBP7.57□□□□□ -1.2
CDH1-206ENST00000564676 A0A0B4J2A0 478 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 PIGBOS1A0A0B4J2F0 54 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 IGHV3-35A0A0C4DH35 117 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 C2orf70A6NJV1 201 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 CEBPZOSA8MTT3 80 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 INS-IGF2F8WCM5 200 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 LGALS9O00182 355 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 TGOLN2O43493 480 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 MT-CO2P00403 227 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 SULT1A3P0DMM9 295 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 SULT1A4P0DMN0 295 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 IL7P13232 177 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 CCR6P51684 374 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 MFAP4P55083 255 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 RBMS2Q15434 407 aaKnown RBP7.56□□□□□ -1.2
CDH1-206ENST00000564676 LYZL2Q7Z4W2 148 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 CENPSQ8N2Z9 138 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 OR52E5Q8NH55 327 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 BSCL2Q96G97 398 aaPredicted RBP7.56□□□□□ -1.2
CDH1-206ENST00000564676 GAR1Q9NY12 217 aaKnown RBP7.56□□□□□ -1.2
CDH1-206ENST00000564676 SIGLEC8Q9NYZ4 499 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 SHPKQ9UHJ6 478 aa7.56□□□□□ -1.2
CDH1-206ENST00000564676 A6NHS1 94 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 I3L2K1 104 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 NUPL2O15504 423 aaKnown RBP7.55□□□□□ -1.2
CDH1-206ENST00000564676 NXPH3O95157 252 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 SFT2D2O95562 160 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 FOLR2P14207 255 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 CD69Q07108 199 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 PPP1R1AQ13522 171 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 CNPY1Q3B7I2 92 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 LCN12Q6JVE5 192 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 SPSB3Q6PJ21 355 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 ATP6V0BQ99437 205 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 C7orf50Q9BRJ6 194 aaKnown RBP7.55□□□□□ -1.2
CDH1-206ENST00000564676 PALMDQ9NP74 551 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 HEYLQ9NQ87 328 aaPredicted RBP7.55□□□□□ -1.2
CDH1-206ENST00000564676 CACFD1Q9UGQ2 172 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 LSM4Q9Y4Z0 139 aaKnown RBP7.55□□□□□ -1.2
CDH1-206ENST00000564676 SMAD5-AS1Q9Y6J3 95 aa7.55□□□□□ -1.2
CDH1-206ENST00000564676 DUXBA0A1W2PPF3 345 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 CORTO00230 105 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 GNG7O60262 68 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 NDUFB6O95139 128 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 IGHV3-48P01763 117 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 RNASE2P10153 161 aaKnown RBP7.54□□□□□ -1.2
CDH1-206ENST00000564676 EDN2P20800 178 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 CBLN1P23435 193 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 SMCO1Q147U7 214 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 DEFB114Q30KQ6 69 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 ANKRD55Q3KP44 614 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 CD300EQ496F6 205 aaPredicted RBP7.54□□□□□ -1.2
CDH1-206ENST00000564676 AARDQ4LEZ3 155 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 TM4SF20Q53R12 229 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 NMSQ5H8A3 153 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 UNQ9165/PRO28630Q6UXU0 137 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 ADAMTSL5Q6ZMM2 481 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 UXS1Q8NBZ7 420 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 DUSP18Q8NEJ0 188 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 OR2K2Q8NGT1 345 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 OR1S1Q8NH92 325 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 TXN2Q99757 166 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 CHRDL1Q9BU40 450 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 C20orf24Q9BUV8 137 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 ZNF436Q9C0F3 470 aaPredicted RBP7.54□□□□□ -1.2
CDH1-206ENST00000564676 HIPK2Q9H2X6 1198 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 TECRQ9NZ01 308 aaKnown RBP7.54□□□□□ -1.2
CDH1-206ENST00000564676 FLVCR2Q9UPI3 526 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 UFC1Q9Y3C8 167 aa7.54□□□□□ -1.2
CDH1-206ENST00000564676 A0A1B0GU03 582 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 TMEM213A2RRL7 107 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 IZUMO1RA6ND01 250 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 F8W735 103 aaPredicted RBP7.53□□□□□ -1.2
CDH1-206ENST00000564676 NDUFA4O00483 81 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 FCGR2BP31994 310 aaPredicted RBP7.53□□□□□ -1.2
CDH1-206ENST00000564676 ADMP35318 185 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 OPRK1P41145 380 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 HTR2BP41595 481 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 NPBWR1P48145 328 aa7.53□□□□□ -1.2
CDH1-206ENST00000564676 ELLP55199 621 aaPredicted RBP7.53□□□□□ -1.2
CDH1-206ENST00000564676 UBE2MP61081 183 aaKnown RBP7.53□□□□□ -1.2
CDH1-206ENST00000564676 RELQ04864 619 aaPredicted RBP7.53□□□□□ -1.2
CDH1-206ENST00000564676 GUCA2BQ16661 112 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms