RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	MARC2	Q969Z3	335 aa		3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	FAM3D	Q96BQ1	224 aa		3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	GALNT14	Q96FL9	552 aa		3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	GINS4	Q9BRT9	223 aa		3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	ZNF436	Q9C0F3	470 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	PLGRKT	Q9HBL7	147 aa		3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	S100A14	Q9HCY8	104 aa		3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	PSORS1C1	Q9UIG5	152 aa		3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	ELF5	Q9UKW6	265 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF4-223	ENST00000564343	DNAH11	Q96DT5	4516 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343		A0A075B6Q4	140 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	IGKV1D-13	A0A0B4J2D9	117 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	MFNG	O00587	321 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	DENR	O43583	198 aa	Known RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	ZNF207	O43670	478 aa	Known RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	DIRAS3	O95661	229 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	IFNA4	P05014	189 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	IGKV1-13	P0DP09	117 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	DEFA4	P12838	97 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	NFYA	P23511	347 aa	Predicted RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	CRHBP	P24387	322 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	PSMD7	P51665	324 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	MFAP2	P55001	183 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	SEC61B	P60468	96 aa	Known RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	MRPS15	P82914	257 aa	Known RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	GAGE2B	Q13066	116 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	EIF4EBP1	Q13541	118 aa	Predicted RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	ARFRP1	Q13795	201 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	CTF1	Q16619	201 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	VWC2	Q2TAL6	325 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	GAGE2E	Q4V326	116 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	LIPK	Q5VXJ0	399 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	GAGE2A	Q6NT46	116 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	PLET1	Q6UQ28	207 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	LINC00336	Q6ZUF6	198 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	SSX9	Q7RTT3	188 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	BPIFB6	Q8NFQ5	453 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	OR11H2	Q8NH07	326 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	TMEM167A	Q8TBQ9	72 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	CD300LF	Q8TDQ1	290 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	TMEM190	Q8WZ59	177 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	RAB3C	Q96E17	227 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	ZNF414	Q96IQ9	312 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	CXorf58	Q96LI9	332 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	OR2A7	Q96R45	310 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	MFF	Q9GZY8	342 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	CSTL1	Q9H114	145 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	C11orf68	Q9H3H3	251 aa	Known RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	PLCXD1	Q9NUJ7	323 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	FKBP14	Q9NWM8	211 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	GAGE2D	Q9UEU5	116 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	SPATA2	Q9UM82	520 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	LSM2	Q9Y333	95 aa	Known RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	RBMX2	Q9Y388	322 aa	Known RBP	3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	UFC1	Q9Y3C8	167 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	NACA	E9PAV3	2078 aa		3.74	□□□□□ -1.81
TCF4-223	ENST00000564343	IGHV3-21	A0A0B4J1V1	117 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	TRAV3	A0A0B4J244	114 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	IGLC7	A0M8Q6	106 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	OR2T8	A6NH00	312 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	MPTX1	A8MV57	137 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	RTL8C	O15255	209 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	TGOLN2	O43493	480 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	DHFR	P00374	187 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	HLA-DQB1	P01920	261 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	CTSD	P07339	412 aa	Predicted RBP	3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	HIST1H1B	P16401	226 aa	Known RBP	3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	HIST1H1D	P16402	221 aa	Known RBP	3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	CD36	P16671	472 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	PTBP1	P26599	531 aa	Known RBP eCLIP	3.73	□□□□□ -1.81	2e-7	■■■■□ 24.3
TCF4-223	ENST00000564343	MAS1L	P35410	378 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	TCTA	P57738	103 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	OR2B8P	P59922	312 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	SNRPE	P62304	92 aa	Known RBP	3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	RPS25	P62851	125 aa	Known RBP	3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	RPL8	P62917	257 aa	Known RBP	3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	UBE2V1	Q13404	147 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	SPHAR	Q15513	63 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	RAB11B	Q15907	218 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	HES5	Q5TA89	166 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	LAMTOR1	Q6IAA8	161 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343		Q6ZS49	121 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	DHRSX	Q8N5I4	330 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	NEXN-AS1	Q8NBZ9	246 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	OR10W1	Q8NGF6	305 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	OR10R2	Q8NGX6	335 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	OR4S2	Q8NH73	311 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	VSTM2A	Q8TAG5	236 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	THAP6	Q8TBB0	222 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	TCTEX1D2	Q8WW35	142 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	RNF2	Q99496	336 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	CHRDL1	Q9BU40	450 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	C20orf24	Q9BUV8	137 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	MND1	Q9BWT6	205 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	DAZ1	Q9NQZ3	744 aa	Known RBP	3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	TAS2R8	Q9NYW2	309 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	RAB22A	Q9UL26	194 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	MRPS7	Q9Y2R9	242 aa	Known RBP	3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	PRELID3B	Q9Y3B1	194 aa		3.73	□□□□□ -1.81
TCF4-223	ENST00000564343	OR2W1	Q9Y3N9	320 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms