RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SULT1A4P0DMN0 295 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 ANXA7P20073 488 aaKnown RBP6.5□□□□□ -1.37
UBR1-204ENST00000563239 VAMP1P23763 118 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 GPR183P32249 361 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 ADMP35318 185 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 ARL3P36405 182 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 INSL3P51460 131 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 UBE2MP61081 183 aaKnown RBP6.5□□□□□ -1.37
UBR1-204ENST00000563239 SRPXP78539 464 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 ERHP84090 104 aaKnown RBP6.5□□□□□ -1.37
UBR1-204ENST00000563239 RPEL1Q2QD12 228 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 FAM209BQ5JX69 171 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 REC114Q7Z4M0 266 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 HAPLN4Q86UW8 402 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 GPHB5Q86YW7 130 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 OR1L6Q8NGR2 347 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 RNASE11Q8TAA1 199 aaKnown RBP6.5□□□□□ -1.37
UBR1-204ENST00000563239 TMEM170AQ8WVE7 144 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 ZC4H2Q9NQZ6 224 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 THYN1Q9P016 225 aa6.5□□□□□ -1.37
UBR1-204ENST00000563239 DUXBA0A1W2PPF3 345 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 CENPXA8MT69 81 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 LGALS9O00182 355 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 TGOLN2O43493 480 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 NXPH3O95157 252 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 MT-CO2P00403 227 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 IGLV1-51P01701 117 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 IGHV3-48P01763 117 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 OR4E1P0C645 316 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 ANXA3P12429 323 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 FCGR2BP31994 310 aaPredicted RBP6.49□□□□□ -1.37
UBR1-204ENST00000563239 SMCO1Q147U7 214 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 UNQ9165/PRO28630Q6UXU0 137 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 PRR25Q96S07 402 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 ATP6V0BQ99437 205 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 CHRDL1Q9BU40 450 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 ELOVL1Q9BW60 279 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 FNDC4Q9H6D8 234 aaPredicted RBP6.49□□□□□ -1.37
UBR1-204ENST00000563239 C21orf62Q9NYP8 219 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 SIGLEC8Q9NYZ4 499 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 MRPL36Q9P0J6 103 aaKnown RBP6.49□□□□□ -1.37
UBR1-204ENST00000563239 HSPB7Q9UBY9 170 aa6.49□□□□□ -1.37
UBR1-204ENST00000563239 IGHV3-35A0A0C4DH35 117 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 A0A1B0GU03 582 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 TMEM213A2RRL7 107 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 OR2T8A6NH00 312 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 CYB5BO43169 146 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 UPK1BO75841 260 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 TCRBP04435 133 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 CTSGP08311 255 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 SLC25A6P12236 298 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 SPNP16150 400 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 SNCAP37840 140 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 HOXA1P49639 335 aaPredicted RBP6.48□□□□□ -1.37
UBR1-204ENST00000563239 TNFRSF9Q07011 255 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 DHRS2Q13268 280 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 ASAH1Q13510 395 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 ZNF846Q147U1 533 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 MLANAQ16655 118 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 GGNBP1Q5YKI7 109 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 LYG2Q86SG7 212 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 OR52B4Q8NGK2 314 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 MISP3Q96FF7 219 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 OR4C12Q96R67 309 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 PDCD10Q9BUL8 212 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 ZNF436Q9C0F3 470 aaPredicted RBP6.48□□□□□ -1.37
UBR1-204ENST00000563239 WDR12Q9GZL7 423 aaKnown RBP6.48□□□□□ -1.37
UBR1-204ENST00000563239 C20orf85Q9H1P6 137 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 RBKSQ9H477 322 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 ZNF256Q9Y2P7 627 aaPredicted RBP6.48□□□□□ -1.37
UBR1-204ENST00000563239 LSM4Q9Y4Z0 139 aaKnown RBP6.48□□□□□ -1.37
UBR1-204ENST00000563239 RYR3Q15413 4870 aa6.48□□□□□ -1.37
UBR1-204ENST00000563239 IZUMO1RA6ND01 250 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 C2orf70A6NJV1 201 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 CEBPZOSA8MTT3 80 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 MPTX1A8MV57 137 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 A8MWP6 167 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 ADAP1O75689 374 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 HOXB5P09067 269 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 FOLR2P14207 255 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 TATDN3Q17R31 274 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 TM4SF20Q53R12 229 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 C2orf83Q53S99 150 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 PLET1Q6UQ28 207 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 MRAPQ8TCY5 172 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 CACNG8Q8WXS5 425 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 PINX1Q96BK5 328 aaKnown RBP6.47□□□□□ -1.37
UBR1-204ENST00000563239 BSCL2Q96G97 398 aaPredicted RBP6.47□□□□□ -1.37
UBR1-204ENST00000563239 TXN2Q99757 166 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 ENY2Q9NPA8 101 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 HEYLQ9NQ87 328 aaPredicted RBP6.47□□□□□ -1.37
UBR1-204ENST00000563239 TMED3Q9Y3Q3 217 aa6.47□□□□□ -1.37
UBR1-204ENST00000563239 KMT2CQ8NEZ4 4911 aaKnown RBP6.46□□□□□ -1.37
UBR1-204ENST00000563239 TRAV6A0A075B6T7 132 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 PIGBOS1A0A0B4J2F0 54 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 C8orf88P0DMB2 117 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 CBLN1P23435 193 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 HTR2BP41595 481 aa6.46□□□□□ -1.38
UBR1-204ENST00000563239 SUB1P53999 127 aaKnown RBP eCLIP6.46□□□□□ -1.38
UBR1-204ENST00000563239 MFAP4P55083 255 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms