RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TPTE2P1Q5T6R2 138 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 RASL11AQ6T310 242 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 TMEM136Q6ZRR5 245 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 MOB3BQ86TA1 216 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 TGIF2LXQ8IUE1 241 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 C8orf31Q8N9H6 132 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 ST6GALNAC3Q8NDV1 305 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 TMEM167AQ8TBQ9 72 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 HARBI1Q96MB7 349 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 HSPB9Q9BQS6 159 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 SNHG12Q9BXW3 62 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 NAT8BQ9UHF3 227 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 CDC42EP3Q9UKI2 254 aa10.64□□□□□ -0.71
USB1-207ENST00000563149 INTS1Q8N201 2190 aaKnown RBP10.64□□□□□ -0.71
USB1-207ENST00000563149 RAI1Q7Z5J4 1906 aaPredicted RBP10.63□□□□□ -0.71
USB1-207ENST00000563149 SPAARA0A1B0GVQ0 90 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 EREGO14944 169 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 TCAPO15273 167 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 REG1AP05451 166 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 TMEM183BQ1AE95 376 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 TOMM20LQ6UXN7 152 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 FAM231DQ6ZW35 169 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 PDPNQ86YL7 162 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 DOLPP1Q86YN1 238 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 DMRTC2Q8IXT2 367 aaPredicted RBP10.63□□□□□ -0.71
USB1-207ENST00000563149 LINC00311Q8N616 119 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 SIGLECL1Q8N7X8 197 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 OR9G1Q8NH87 305 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 ZNF596Q8TC21 504 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 FLYWCH2Q96CP2 140 aaKnown RBP10.63□□□□□ -0.71
USB1-207ENST00000563149 FAM122AQ96E09 287 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 FAM167A-AS1Q96KT0 104 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 NEU1Q99519 415 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 CHRDL1Q9BU40 450 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 SAMD10Q9BYL1 202 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 VPS13AQ96RL7 3174 aa10.63□□□□□ -0.71
USB1-207ENST00000563149 IZUMO1RA6ND01 250 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 FRYLO94915 3013 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 GPX1P07203 203 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 GATA2P23769 480 aaPredicted RBP10.62□□□□□ -0.71
USB1-207ENST00000563149 TMEM108Q6UXF1 575 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 OR4C13Q8NGP0 309 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 TMEM186Q96B77 213 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 MIEN1Q9BRT3 115 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 SLC25A2Q9BXI2 301 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 MRPL20Q9BYC9 149 aaKnown RBP10.62□□□□□ -0.71
USB1-207ENST00000563149 RNASE7Q9H1E1 156 aaKnown RBP10.62□□□□□ -0.71
USB1-207ENST00000563149 PARD6AQ9NPB6 346 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 CBLN4Q9NTU7 201 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 BPIFB3P59826 476 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 MLANAQ16655 118 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 RPRMLQ8N4K4 120 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 THAP8Q8NA92 274 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 OR10W1Q8NGF6 305 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
USB1-207ENST00000563149 ZNF430Q9H8G1 570 aaPredicted RBP10.62□□□□□ -0.71
USB1-207ENST00000563149 GNB4Q9HAV0 340 aa10.62□□□□□ -0.71
USB1-207ENST00000563149 DMDP11532 3685 aa10.61□□□□□ -0.71
USB1-207ENST00000563149 TDGF1P3P51864 188 aa10.61□□□□□ -0.71
USB1-207ENST00000563149 UBE2L3P68036 154 aaKnown RBP10.61□□□□□ -0.71
USB1-207ENST00000563149 FAM27E3Q08E93 113 aa10.61□□□□□ -0.71
USB1-207ENST00000563149 SSX8Q7RTT4 187 aa10.61□□□□□ -0.71
USB1-207ENST00000563149 FAM57AQ8TBR7 257 aa10.61□□□□□ -0.71
USB1-207ENST00000563149 RND1Q92730 232 aa10.61□□□□□ -0.71
USB1-207ENST00000563149 ZNF586Q9NXT0 402 aa10.61□□□□□ -0.71
USB1-207ENST00000563149 TCRBV4S1A1TA0A5B7 111 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 C17orf100A8MU93 164 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 COX7A2P2O60397 106 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 MGST1P10620 155 aaKnown RBP10.6□□□□□ -0.71
USB1-207ENST00000563149 C10orf113Q5VZT2 155 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 KCNS1Q96KK3 526 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 PAXXQ9BUH6 204 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 VAMP8Q9BV40 100 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 ZNF331Q9NQX6 463 aaPredicted RBP10.6□□□□□ -0.71
USB1-207ENST00000563149 PRR14LQ5THK1 2151 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 PPIAL4EA0A075B759 164 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 PPIAL4DF5H284 164 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 FRMD6-AS1P0C7T7 363 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 PPIAL4FP0DN26 164 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 CHRNB4P30926 498 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 FXYD3Q14802 87 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 TMEM200BQ69YZ2 307 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 ZNF705AQ6ZN79 300 aaPredicted RBP10.6□□□□□ -0.71
USB1-207ENST00000563149 ASCL5Q7RTU5 278 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 STXBP6Q8NFX7 210 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 OR4B1Q8NGF8 309 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 OR2T6Q8NHC8 308 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 SMIM12Q96EX1 92 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 GRAMD2BQ96HH9 432 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 SERTAD4Q9NUC0 356 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 PPIAL4AQ9Y536 164 aa10.6□□□□□ -0.71
USB1-207ENST00000563149 DYSFO75923 2080 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 ZNF253O75346 499 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 COL8A2P25067 703 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 MC5RP33032 325 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 ZNF137PP52743 207 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 ETFRF1Q6IPR1 90 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 SNRNP40Q96DI7 357 aaKnown RBP10.59□□□□□ -0.71
USB1-207ENST00000563149 MBD6Q96DN6 1003 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 MRPL27Q9P0M9 148 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms