RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CT83Q5H943 113 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 C1QL4Q86Z23 238 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 CENPSQ8N2Z9 138 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 OR52E5Q8NH55 327 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 DCUN1D4Q92564 292 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 DPF1Q92782 380 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 DLX4Q92988 240 aaPredicted RBP4.75□□□□□ -1.65
CNOT1-204ENST00000563130 GPR146Q96CH1 333 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 FBXL7Q9UJT9 491 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 DNAH3Q8TD57 4116 aa4.75□□□□□ -1.65
CNOT1-204ENST00000563130 MEGF8Q7Z7M0 2845 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 DUXBA0A1W2PPF3 345 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 SFT2D2O95562 160 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 DEFA4P12838 97 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 ZP3P21754 424 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 SRPXP78539 464 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 EXOSC2Q13868 293 aaKnown RBP4.74□□□□□ -1.65
CNOT1-204ENST00000563130 KLF5Q13887 457 aaPredicted RBP4.74□□□□□ -1.65
CNOT1-204ENST00000563130 ANKRD55Q3KP44 614 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 PVRIGQ6DKI7 326 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 LYZL2Q7Z4W2 148 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 LGI3Q8N145 548 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 OR1P1Q8NH06 330 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 HINT2Q9BX68 163 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.74□□□□□ -1.65
CNOT1-204ENST00000563130 THYN1Q9P016 225 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 TBC1D24Q9ULP9 559 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 FLVCR2Q9UPI3 526 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 PIGBOS1A0A0B4J2F0 54 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 MFSD2BA6NFX1 497 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 BMPR1BO00238 502 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 OVOL1O14753 267 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 RAB25P57735 213 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 VAMP2P63027 116 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 IFITM3Q01628 133 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF846Q147U1 533 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 BSXQ3C1V8 233 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 OR1L6Q8NGR2 347 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 VN1R17PQ8TDU5 208 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 CXorf58Q96LI9 332 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 PLEKHA3Q9HB20 300 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 CACNG5Q9UF02 275 aa4.74□□□□□ -1.65
CNOT1-204ENST00000563130 TRBV7-1A0A0A6YYK4 115 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 C9orf170A2RU37 121 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 K7EIM0 57 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 PITX3O75364 302 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 UPK1BO75841 260 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 IFNA17P01571 189 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 TCRBP04435 133 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 OR4E1P0C645 316 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 SPCS3P61009 180 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 DEFA6Q01524 100 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 DHRS2Q13268 280 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 ASAH1Q13510 395 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 MLANAQ16655 118 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 ACSM6Q6P461 480 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 RNASE11Q8TAA1 199 aaKnown RBP4.73□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF502Q8TBZ5 544 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 EEF1AKMT3Q96AZ1 226 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 ATP6V0BQ99437 205 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 GPR61Q9BZJ8 451 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 AP5S1Q9NUS5 200 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 CACFD1Q9UGQ2 172 aa4.73□□□□□ -1.65
CNOT1-204ENST00000563130 A0A1B0GU03 582 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SEC14L6B5MCN3 397 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 I3L2K1 104 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 CYB5BO43169 146 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 HLA-AP01891 365 aaKnown RBP4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SULT1A3P0DMM9 295 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SULT1A4P0DMN0 295 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 RNASE2P10153 161 aaKnown RBP4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SLC25A6P12236 298 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 ANXA7P20073 488 aaKnown RBP4.72□□□□□ -1.65
CNOT1-204ENST00000563130 INSL3P51460 131 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 KRTAP10-11P60412 298 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 ERHP84090 104 aaKnown RBP4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SMCO1Q147U7 214 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SPINK9Q5DT21 86 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 C9orf66Q5T8R8 295 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SLC25A24Q6NUK1 477 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 IL34Q6ZMJ4 242 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SCARB1Q8WTV0 552 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 PDCD10Q9BUL8 212 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 C20orf85Q9H1P6 137 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 HSPB7Q9UBY9 170 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 TMED3Q9Y3Q3 217 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 S4R3C0 116 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 PPP5D1E7EU14 171 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 GGCTO75223 188 aaKnown RBP4.72□□□□□ -1.65
CNOT1-204ENST00000563130 IGHV3-23P01764 117 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 CLEC3BP05452 202 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 FCGR2BP31994 310 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-204ENST00000563130 SYNJ2BPP57105 145 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 TNFRSF9Q07011 255 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 RPEL1Q2QD12 228 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 CLEC19AQ6UXS0 136 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 LYG2Q86SG7 212 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 GPHB5Q86YW7 130 aa4.72□□□□□ -1.65
CNOT1-204ENST00000563130 OR9G4Q8NGQ1 327 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms