RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 FAM240BA0A1B0GVZ2 78 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 PITX3O75364 302 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
CLK3-207ENST00000562389 SUB1P53999 127 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLK3-207ENST00000562389 SYNJ2BPP57105 145 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 IFITM3Q01628 133 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 TNFRSF9Q07011 255 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 TATDN3Q17R31 274 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 BSXQ3C1V8 233 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 OR9G4Q8NGQ1 327 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 SCARB1Q8WTV0 552 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 MISP3Q96FF7 219 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 NUDT15Q9NV35 164 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 C21orf62Q9NYP8 219 aa12.79□□□□□ -0.36
CLK3-207ENST00000562389 CEBPZOSA8MTT3 80 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 I3L2K1 104 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 CORTO00230 105 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 SAP30O75446 220 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 NXPH3O95157 252 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 CLEC3BP05452 202 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 GPR183P32249 361 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 OR1S1Q8NH92 325 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 ELOVL1Q9BW60 279 aa12.78□□□□□ -0.36
CLK3-207ENST00000562389 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
CLK3-207ENST00000562389 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 IGHV3-21A0A0B4J1V1 117 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 F8W735 103 aaPredicted RBP12.77□□□□□ -0.37
CLK3-207ENST00000562389 TGOLN2O43493 480 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 MT-CO2P00403 227 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 HOXB5P09067 269 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 FCGR2BP31994 310 aaPredicted RBP12.77□□□□□ -0.37
CLK3-207ENST00000562389 HTR2BP41595 481 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 KRTAP10-11P60412 298 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 GGNBP1Q5YKI7 109 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 REC114Q7Z4M0 266 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 GPHB5Q86YW7 130 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 MITD1Q8WV92 249 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 BSCL2Q96G97 398 aaPredicted RBP12.77□□□□□ -0.37
CLK3-207ENST00000562389 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
CLK3-207ENST00000562389 PEMTQ9UBM1 199 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 NOTCH1P46531 2555 aa12.77□□□□□ -0.37
CLK3-207ENST00000562389 FAM90A26D6RGX4 464 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 LGALS9O00182 355 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 OR2C1O95371 312 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 H2AFB2P0C5Z0 115 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 PLET1Q6UQ28 207 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 SLC24A4Q8NFF2 622 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 OR52B4Q8NGK2 314 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 ENKURQ8TC29 256 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 DTD1Q8TEA8 209 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 OR4C12Q96R67 309 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 TXN2Q99757 166 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 HIPK2Q9H2X6 1198 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 RBKSQ9H477 322 aa12.76□□□□□ -0.37
CLK3-207ENST00000562389 AURKAIP1Q9NWT8 199 aaPredicted RBP12.76□□□□□ -0.37
CLK3-207ENST00000562389 GAR1Q9NY12 217 aaKnown RBP12.76□□□□□ -0.37
CLK3-207ENST00000562389 OR2T8A6NH00 312 aa12.75□□□□□ -0.37
CLK3-207ENST00000562389 ADAP1O75689 374 aa12.75□□□□□ -0.37
CLK3-207ENST00000562389 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
CLK3-207ENST00000562389 MFAP4P55083 255 aa12.75□□□□□ -0.37
CLK3-207ENST00000562389 Q56UQ5 140 aa12.75□□□□□ -0.37
CLK3-207ENST00000562389 IL34Q6ZMJ4 242 aa12.75□□□□□ -0.37
CLK3-207ENST00000562389 PINX1Q96BK5 328 aaKnown RBP12.75□□□□□ -0.37
CLK3-207ENST00000562389 ZC4H2Q9NQZ6 224 aa12.75□□□□□ -0.37
CLK3-207ENST00000562389 SIGLEC8Q9NYZ4 499 aa12.75□□□□□ -0.37
CLK3-207ENST00000562389 DNAH3Q8TD57 4116 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 IFNA21P01568 189 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 CSN3P07498 182 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 DEFA1P59665 94 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 DEFA3P59666 94 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 FAM106AQ4KMX7 169 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 C11orf87Q6NUJ2 197 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 UBAC2Q8NBM4 344 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 ZNF436Q9C0F3 470 aaPredicted RBP12.74□□□□□ -0.37
CLK3-207ENST00000562389 U3KQ87 197 aa12.74□□□□□ -0.37
CLK3-207ENST00000562389 A8MWP6 167 aa12.73□□□□□ -0.37
CLK3-207ENST00000562389 MED6O75586 246 aa12.73□□□□□ -0.37
CLK3-207ENST00000562389 NPY1RP25929 384 aa12.73□□□□□ -0.37
CLK3-207ENST00000562389 OPRK1P41145 380 aa12.73□□□□□ -0.37
CLK3-207ENST00000562389 NOXA1Q86UR1 476 aa12.73□□□□□ -0.37
CLK3-207ENST00000562389 RNASEH2CQ8TDP1 164 aaKnown RBP12.73□□□□□ -0.37
CLK3-207ENST00000562389 ZNF431Q8TF32 576 aaPredicted RBP12.73□□□□□ -0.37
CLK3-207ENST00000562389 TMEM170AQ8WVE7 144 aa12.73□□□□□ -0.37
CLK3-207ENST00000562389 SEC22CQ9BRL7 303 aa12.73□□□□□ -0.37
CLK3-207ENST00000562389 CHRDL1Q9BU40 450 aa12.73□□□□□ -0.37
CLK3-207ENST00000562389 MPTX1A8MV57 137 aa12.72□□□□□ -0.37
CLK3-207ENST00000562389 IGLV1-51P01701 117 aa12.72□□□□□ -0.37
CLK3-207ENST00000562389 CTSGP08311 255 aa12.72□□□□□ -0.37
CLK3-207ENST00000562389 ADMP35318 185 aa12.72□□□□□ -0.37
CLK3-207ENST00000562389 NRARPQ7Z6K4 114 aa12.72□□□□□ -0.37
CLK3-207ENST00000562389 FNDC4Q9H6D8 234 aaPredicted RBP12.72□□□□□ -0.37
CLK3-207ENST00000562389 RPS10-NUDT3A0A1W2PQS6 291 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 NDUFA4O00483 81 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 NUPL2O15504 423 aaKnown RBP12.71□□□□□ -0.37
CLK3-207ENST00000562389 GNG7O60262 68 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 IFNA10P01566 189 aa12.71□□□□□ -0.37
CLK3-207ENST00000562389 IGHV3-48P01763 117 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms