RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 FBLP22087 321 aaKnown RBP15.41■□□□□ 0.06
RAB40C-206ENST00000561781 GCHFRP30047 84 aa15.41■□□□□ 0.06
RAB40C-206ENST00000561781 CEBPDP49716 269 aaPredicted RBP15.41■□□□□ 0.06
RAB40C-206ENST00000561781 CHCHD1Q96BP2 118 aaKnown RBP15.41■□□□□ 0.06
RAB40C-206ENST00000561781 MAP1LC3CQ9BXW4 147 aa15.41■□□□□ 0.06
RAB40C-206ENST00000561781 IGHV3-15A0A0B4J1V0 119 aa15.41■□□□□ 0.06
RAB40C-206ENST00000561781 CLDN14O95500 239 aa15.41■□□□□ 0.06
RAB40C-206ENST00000561781 PQLC2Q6ZP29 291 aa15.41■□□□□ 0.06
RAB40C-206ENST00000561781 TAAR6Q96RI8 345 aa15.41■□□□□ 0.06
RAB40C-206ENST00000561781 MRPL16Q9NX20 251 aaKnown RBP15.41■□□□□ 0.06
RAB40C-206ENST00000561781 OR1A1Q9P1Q5 309 aa15.41■□□□□ 0.06
RAB40C-206ENST00000561781 ADAMTS20P59510 1910 aa15.4■□□□□ 0.06
RAB40C-206ENST00000561781 CNTRLQ7Z7A1 2325 aa15.4■□□□□ 0.06
RAB40C-206ENST00000561781 KLRC4-KLRK1H3BQV0 150 aa15.4■□□□□ 0.06
RAB40C-206ENST00000561781 ARL4DP49703 201 aa15.4■□□□□ 0.06
RAB40C-206ENST00000561781 LOXL2Q9Y4K0 774 aa15.4■□□□□ 0.06
RAB40C-206ENST00000561781 PTPRBP23467 1997 aa15.4■□□□□ 0.06
RAB40C-206ENST00000561781 OR5AL1P0C617 328 aa15.39■□□□□ 0.05
RAB40C-206ENST00000561781 PATE4P0C8F1 98 aa15.39■□□□□ 0.05
RAB40C-206ENST00000561781 SPACA9Q96E40 222 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-206ENST00000561781 NAA38Q9BRA0 125 aaKnown RBP15.39■□□□□ 0.05
RAB40C-206ENST00000561781 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-206ENST00000561781 SERTAD4Q9NUC0 356 aa15.39■□□□□ 0.05
RAB40C-206ENST00000561781 ZNF407Q9C0G0 2248 aa15.39■□□□□ 0.05
RAB40C-206ENST00000561781 FAM27BQ5VT28 67 aa15.39■□□□□ 0.05
RAB40C-206ENST00000561781 H1FXQ92522 213 aaKnown RBP15.39■□□□□ 0.05
RAB40C-206ENST00000561781 BOKQ9UMX3 212 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-206ENST00000561781 IGHV1-24A0A0C4DH33 117 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 LRRC30A6NM36 301 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 CRYGCP07315 174 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 FGF12P61328 243 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 URB1-AS1Q96HZ7 61 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 FGF21Q9NSA1 209 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 KCNS2Q9ULS6 477 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 OR9G9P0C7N8 305 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 CEACAM21Q3KPI0 293 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 PDLIM3Q53GG5 364 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-206ENST00000561781 OR1L3Q8NH93 324 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 SCNM1Q9BWG6 230 aa15.38■□□□□ 0.05
RAB40C-206ENST00000561781 DIDO1Q9BTC0 2240 aaKnown RBP15.37■□□□□ 0.05
RAB40C-206ENST00000561781 ZG16O60844 167 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 RBMXL2O75526 392 aaKnown RBP15.37■□□□□ 0.05
RAB40C-206ENST00000561781 FAM69BQ5VUD6 431 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 METTL7AQ9H8H3 244 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 MGAQ8IWI9 3026 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 C21orf140B9A014 251 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.37■□□□□ 0.05
RAB40C-206ENST00000561781 LIPFP07098 398 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 IGFBP2P18065 325 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 MFAP2P55001 183 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 AESQ08117 197 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 SHISA2Q6UWI4 295 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 ZNF645Q8N7E2 425 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 ZDHHC16Q969W1 377 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 DEPPQ9NTK1 212 aa15.37■□□□□ 0.05
RAB40C-206ENST00000561781 NPIPA3F8WFD2 350 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 ADAMTSL5Q6ZMM2 481 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 LINC00173Q6ZV60 143 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 OR4A16Q8NH70 328 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 GRAMD2BQ96HH9 432 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 TRIB1Q96RU8 372 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 TRBV6-6A0A0A6YYG2 114 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 TIMM23BQ5SRD1 257 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 RNF138Q8WVD3 245 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 UCN2Q96RP3 112 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 AKIRIN1Q9H9L7 192 aaPredicted RBP15.36■□□□□ 0.05
RAB40C-206ENST00000561781 APC2O95996 2303 aa15.36■□□□□ 0.05
RAB40C-206ENST00000561781 SH2D7A6NKC9 451 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-206ENST00000561781 NPIPB11E5RHQ5 1161 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-206ENST00000561781 DPF1Q92782 380 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 RAB37Q96AX2 223 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 MS4A5Q9H3V2 200 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 TRAPPC2LQ9UL33 140 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 BOD1L1Q8NFC6 3051 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 ZNF32P17041 273 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 SAMD5Q5TGI4 173 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 RABAC1Q9UI14 185 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 HSPB8Q9UJY1 196 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 JPT1Q9UK76 154 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 FER1L5A0AVI2 2057 aa15.35■□□□□ 0.05
RAB40C-206ENST00000561781 G6PCP35575 357 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 CEACAM16Q2WEN9 425 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 GDF5OSQ5U4N7 250 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 LINC01545Q5VT33 79 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 SSX8Q7RTT4 187 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 SPANXB1Q9NS25 103 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-206ENST00000561781 HILPDAQ9Y5L2 63 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 MED12LQ86YW9 2145 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 IGLV3-32A0A0A0MS00 114 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 SNAI2O43623 268 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 FOXE3Q13461 319 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 SPATA46Q5T0L3 261 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 ZNF418Q8TF45 676 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-206ENST00000561781 LRRC29Q8WV35 223 aa15.34■□□□□ 0.05
RAB40C-206ENST00000561781 FGF23Q9GZV9 251 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-206ENST00000561781 P0C879 139 aa15.33■□□□□ 0.04
RAB40C-206ENST00000561781 CYB561P49447 251 aa15.33■□□□□ 0.04
RAB40C-206ENST00000561781 SPINK9Q5DT21 86 aa15.33■□□□□ 0.04
RAB40C-206ENST00000561781 DSPP15924 2871 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms