RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TMEM189A5PLL7 270 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 OR2T8A6NH00 312 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 KNCNA6PVL3 124 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 ITGB1BP1O14713 200 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 RRASP10301 218 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 AREGP15514 252 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 HIST1H1BP16401 226 aaKnown RBP3.69□□□□□ -1.82
HERC1-213ENST00000561359 GNB3P16520 340 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 ZNF93P35789 620 aaPredicted RBP3.69□□□□□ -1.82
HERC1-213ENST00000561359 CCR9P51686 369 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 ERVFC1-1P60608 527 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 SNRPGP62308 76 aaKnown RBP3.69□□□□□ -1.82
HERC1-213ENST00000561359 CLINT1Q14677 625 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 USF2Q15853 346 aaPredicted RBP3.69□□□□□ -1.82
HERC1-213ENST00000561359 ATP6AP1Q15904 470 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 HSD17B12Q53GQ0 312 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 FAM222AQ5U5X8 452 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 TRPT1Q86TN4 253 aaKnown RBP3.69□□□□□ -1.82
HERC1-213ENST00000561359 GID4Q8IVV7 300 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 MMD2Q8IY49 270 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 TMEM116Q8NCL8 245 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 CSNK1G2-AS1Q8NCQ2 148 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 ZNF502Q8TBZ5 544 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 CCDC124Q96CT7 223 aaKnown RBP3.69□□□□□ -1.82
HERC1-213ENST00000561359 CYYR1Q96J86 154 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 IL4I1Q96RQ9 567 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 PRRG3Q9BZD7 231 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 Q9H3A6 140 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 LINC00588Q9Y4M8 146 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 IGHV3OR16-13A0A075B7E8 117 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 IGHV3-74A0A0B4J1X5 117 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 OR4C45A6NMZ5 311 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 C15orf62A8K5M9 175 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 TEX22C9J3V5 150 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 KRBOX1C9JBD0 128 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 K7EMT4 169 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 NDUFA4O00483 81 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 CHEK1O14757 476 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 RGS5O15539 181 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 PDCD6O75340 191 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 NDUFS6O75380 124 aaKnown RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 CRTAPO75718 401 aaPredicted RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 S100A8P05109 93 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 GLAP06280 429 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 SAA1P0DJI8 122 aaPredicted RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 HSD17B1P14061 328 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 PRKACGP22612 351 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 ZBTB25P24278 435 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 MAS1LP35410 378 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 POLR2IP36954 125 aaKnown RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 SPCS3P61009 180 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 DAD1P61803 113 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 PPP3R1P63098 170 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 ZNF85Q03923 595 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 GPR176Q14439 515 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 NEDD8Q15843 81 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 BAK1Q16611 211 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 RNASE12Q5GAN4 147 aaKnown RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 ACTL10Q5JWF8 245 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 DDI2Q5TDH0 399 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 KDM4DQ6B0I6 523 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 SSX7Q7RTT5 188 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 TCF24Q7RTU0 167 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 DHRSXQ8N5I4 330 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 EIF4E3Q8N5X7 224 aaKnown RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 BPIFB6Q8NFQ5 453 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 RBPMSQ93062 196 aaKnown RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 FUNDC2Q9BWH2 189 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 SELENOIQ9C0D9 397 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 SLIRPQ9GZT3 109 aaKnown RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 OR51M1Q9H341 326 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 SAV1Q9H4B6 383 aaPredicted RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 BANF2Q9H503 90 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 FNDC4Q9H6D8 234 aaPredicted RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 CHMP1AQ9HD42 196 aaPredicted RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 GSN-AS1Q9NRJ2 163 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 ZNF586Q9NXT0 402 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 TAS2R4Q9NYW5 299 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 OR1A1Q9P1Q5 309 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 XCL2Q9UBD3 114 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 WARS2Q9UGM6 360 aaKnown RBP3.68□□□□□ -1.82
HERC1-213ENST00000561359 RABAC1Q9UI14 185 aa3.68□□□□□ -1.82
HERC1-213ENST00000561359 IGLV11-55A0A075B6I3 123 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 IGHV3OR16-12A0A075B7B8 117 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 IGHV7-4-1A0A0J9YVY3 117 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 RAB19A4D1S5 217 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 CGB1A6NKQ9 187 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 PRSS47A8MTI9 375 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 J3QLW9 94 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 GNGT2O14610 69 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 NUPL2O15504 423 aaKnown RBP3.67□□□□□ -1.82
HERC1-213ENST00000561359 YIF1AO95070 293 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 CST1P01037 141 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 EIF4EP06730 217 aaKnown RBP3.67□□□□□ -1.82
HERC1-213ENST00000561359 CRYGCP07315 174 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 IL6RP08887 468 aaPredicted RBP3.67□□□□□ -1.82
HERC1-213ENST00000561359 P0C879 139 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 ANXA8P13928 327 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms