RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 SLC38A6Q8IZM9 456 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 PUSL1Q8N0Z8 303 aaKnown RBP4.62□□□□□ -1.67
LRRC28-220ENST00000561253 TOMM5Q8N4H5 51 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 OR4C13Q8NGP0 309 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 OCC1Q8TAD7 63 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 MARCH1Q8TCQ1 289 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 S100ZQ8WXG8 99 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF486Q96H40 463 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-220ENST00000561253 PRRT1Q99946 306 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 FBXL15Q9H469 300 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 FBXO7Q9Y3I1 522 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 RBM7Q9Y580 266 aaKnown RBP4.62□□□□□ -1.67
LRRC28-220ENST00000561253 A0A087WYN8 130 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 CLPSL1A2RUU4 121 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 CRYM-AS1A6NIL9 109 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 RNF212BA8MTL3 300 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 DISC1C4P0D8 188 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 E7EUB6 86 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 ARPC1BO15143 372 aaKnown RBP4.61□□□□□ -1.67
LRRC28-220ENST00000561253 FCGR3BO75015 233 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 UPK1BO75841 260 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 S1PR2O95136 353 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 NDUFB6O95139 128 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 APOA2P02652 100 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 AMBPP02760 352 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 RLN1P04808 185 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 IFNA6P05013 189 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 SAA1P0DJI8 122 aaPredicted RBP4.61□□□□□ -1.67
LRRC28-220ENST00000561253 RRASP10301 218 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 UCP1P25874 307 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 CCR6P51684 374 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 PIGPP57054 158 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 AP3S2P59780 193 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 DHODHQ02127 395 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 ASAH1Q13510 395 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 HES1Q14469 280 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 ABCA11PQ4W5N1 156 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 TCTEX1D4Q5JR98 221 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 C10orf99Q6UWK7 81 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 VKORC1L1Q8N0U8 176 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 TCTEX1D1Q8N7M0 179 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 ADAD2Q8NCV1 583 aaKnown RBP4.61□□□□□ -1.67
LRRC28-220ENST00000561253 OR4F5Q8NH21 305 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 OR51H1Q8NH63 302 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 OR4S2Q8NH73 311 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 LHFPL5Q8TAF8 219 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 GLYATL2Q8WU03 294 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 TCTEX1D2Q8WW35 142 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 BORCS5Q969J3 196 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 FLYWCH2Q96CP2 140 aaKnown RBP4.61□□□□□ -1.67
LRRC28-220ENST00000561253 GALNT14Q96FL9 552 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 SEC22AQ96IW7 307 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 DUX3Q96PT4 197 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 TP53RKQ96S44 253 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 CITED1Q99966 193 aa4.61□□□□□ -1.67
LRRC28-220ENST00000561253 C7orf50Q9BRJ6 194 aaKnown RBP4.61□□□□□ -1.67
LRRC28-220ENST00000561253 TRAV3A0A0B4J244 114 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 A0A0G2JRQ6 117 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 A0A1B0GUS0 222 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 NAP1L6A6NFF2 107 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 H0Y980 276 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 H7C2Y5 167 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 LYRM1O43325 122 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 SOX15O60248 233 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 CDK2AP2O75956 126 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 CDS2O95674 445 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 IGKV1-5P01602 117 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 KIR2DS2P43631 304 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 TAS2R31P59538 309 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 KIAA0141Q14154 515 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-220ENST00000561253 PRSS8Q16651 343 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 RTL8BQ17RB0 113 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 SCGB2B2Q4G0G5 96 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 AARDQ4LEZ3 155 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 LBHQ53QV2 105 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-220ENST00000561253 OR2B11Q5JQS5 317 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 FFAR4Q5NUL3 377 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 TRIQKQ629K1 86 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 LPCAT3Q6P1A2 487 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF562Q6V9R5 426 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM182Q6ZP80 229 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-220ENST00000561253 PPP1R27Q86WC6 154 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 CMTM1Q8IZ96 169 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 SPAG16Q8N0X2 631 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 KLHDC1Q8N7A1 406 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 MINDY2Q8NBR6 621 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM167AQ8TBQ9 72 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 MYOZ3Q8TDC0 251 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 CD300LFQ8TDQ1 290 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 NOL4LQ96MY1 436 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-220ENST00000561253 TSNAXQ99598 290 aaKnown RBP4.6□□□□□ -1.67
LRRC28-220ENST00000561253 SLC25A21Q9BQT8 299 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-220ENST00000561253 OR51J1Q9H342 316 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 NAA60Q9H7X0 242 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF430Q9H8G1 570 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-220ENST00000561253 MCUBQ9NWR8 336 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 BET1LQ9NYM9 111 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 COMMD9Q9P000 198 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 SCP2D1Q9UJQ7 156 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 PRELID3BQ9Y3B1 194 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms