RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
TRAF3-208ENST00000560371 RRHO14718 337 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 CA7P43166 264 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 H2BFSP57053 126 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 IFITM3Q01628 133 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 TANC1Q9C0D5 1861 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 AGAP20933 346 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 C11orf44Q8N8P7 122 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 CACNG8Q8WXS5 425 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 TCRBV4S1A1TA0A5B7 111 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 H7C1H1 209 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 M0R381 172 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 LGALS3P17931 250 aaKnown RBP11.29□□□□□ -0.6
TRAF3-208ENST00000560371 SLC25A28Q96A46 364 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 WFIKKN1Q96NZ8 548 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 PAPPA-AS1Q5QFB9 102 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 COL25A1Q9BXS0 654 aaPredicted RBP11.29□□□□□ -0.6
TRAF3-208ENST00000560371 TBL2Q9Y4P3 447 aaKnown RBP11.29□□□□□ -0.6
TRAF3-208ENST00000560371 TNFRSF18Q9Y5U5 241 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 A0A087X0M5 115 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 A0A1B0GX30 115 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 LINC00862A6NCI5 91 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 STHQ8IWL8 128 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 HIST1H4GQ99525 98 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 MESP1Q9BRJ9 268 aa11.29□□□□□ -0.6
TRAF3-208ENST00000560371 LDLRAD2Q5SZI1 272 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 MRPS16Q9Y3D3 137 aaKnown RBP11.28□□□□□ -0.6
TRAF3-208ENST00000560371 LEPROTL1O95214 131 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 GCHFRP30047 84 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 C20orf204Q6ZNR8 217 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 HIST1H2BAQ96A08 127 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 LINC01587Q99440 93 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 ZNF660Q6AZW8 331 aaPredicted RBP11.28□□□□□ -0.6
TRAF3-208ENST00000560371 COPS9Q8WXC6 57 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 ZNF250P15622 560 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 MDKP21741 143 aaPredicted RBP11.28□□□□□ -0.6
TRAF3-208ENST00000560371 UCP1P25874 307 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
TRAF3-208ENST00000560371 TMEM101Q96IK0 257 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 RPRMQ9NS64 109 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 A0A1B0GTI1 187 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 PARLQ9H300 379 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 TANC2Q9HCD6 1990 aa11.28□□□□□ -0.6
TRAF3-208ENST00000560371 CENPWQ5EE01 88 aa11.27□□□□□ -0.6
TRAF3-208ENST00000560371 GTSCR1Q86UQ5 136 aa11.27□□□□□ -0.6
TRAF3-208ENST00000560371 OR10AG1Q8NH19 301 aa11.27□□□□□ -0.6
TRAF3-208ENST00000560371 MED12LQ86YW9 2145 aa11.27□□□□□ -0.6
TRAF3-208ENST00000560371 TRGV2A0A075B6R0 118 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.61
TRAF3-208ENST00000560371 NUP210Q8TEM1 1887 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-208ENST00000560371 RBFOX2O43251 390 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRAF3-208ENST00000560371 NPIPB7O75200 414 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 MORN2Q502X0 79 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 PSMG3Q9BT73 122 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-208ENST00000560371 PLSCR4Q9NRQ2 329 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 C2orf16Q68DN1 1984 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 CCDC168Q8NDH2 2452 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 SAA2P0DJI9 122 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-208ENST00000560371 IGFBP2P18065 325 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 TMEM70Q9BUB7 260 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 TEX45Q8NA69 505 aa11.27□□□□□ -0.61
TRAF3-208ENST00000560371 DENND4AQ7Z401 1863 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 NAV3Q8IVL0 2385 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 C2orf68Q2NKX9 166 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 DANCRP0C864 163 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 RND3P61587 244 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 WDR87Q6ZQQ6 2873 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 IGHV1-46P01743 117 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 IL6RP08887 468 aaPredicted RBP11.26□□□□□ -0.61
TRAF3-208ENST00000560371 WNT2P09544 360 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 EFNA4P52798 201 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 ZNF497Q6ZNH5 498 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 C17orf82Q86X59 251 aaPredicted RBP11.26□□□□□ -0.61
TRAF3-208ENST00000560371 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
TRAF3-208ENST00000560371 TRAF4Q9BUZ4 470 aaPredicted RBP11.26□□□□□ -0.61
TRAF3-208ENST00000560371 SAA1P0DJI8 122 aaPredicted RBP11.25□□□□□ -0.61
TRAF3-208ENST00000560371 GGNQ86UU5 652 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 OR52E5Q8NH55 327 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 RARRES2Q99969 163 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
TRAF3-208ENST00000560371 DSCAMO60469 2012 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 PET117Q6UWS5 81 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 A0A0G2JNJ9 132 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 ASIPP42127 132 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 Q9UFV3 132 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 MSRB2Q9Y3D2 182 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 DENND4CQ5VZ89 1909 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 PIEZO1Q92508 2521 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 PRR32B1ATL7 298 aa11.25□□□□□ -0.61
TRAF3-208ENST00000560371 RHOGP84095 191 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms