RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 ENY2Q9NPA8 101 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 HEYLQ9NQ87 328 aaPredicted RBP8.94□□□□□ -0.98
USP3-218ENST00000560202 NDUFA4L2Q9NRX3 87 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 C1RLQ9NZP8 487 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 A0A1B0GW64 132 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 E7EUB6 86 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 TGOLN2O43493 480 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 JTBO76095 146 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 GPX4P36969 197 aaPredicted RBP8.94□□□□□ -0.98
USP3-218ENST00000560202 COMPP49747 757 aaPredicted RBP8.94□□□□□ -0.98
USP3-218ENST00000560202 GNB1P62873 340 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 NHLH2Q02577 135 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 ZNF124Q15973 351 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 DEFB112Q30KQ8 113 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 TEX29Q8N6K0 151 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 OR4C12Q96R67 309 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 HRH4Q9H3N8 390 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 RPS10P5Q9NQ39 176 aa8.94□□□□□ -0.98
USP3-218ENST00000560202 STRAPQ9Y3F4 350 aaKnown RBP8.94□□□□□ -0.98
USP3-218ENST00000560202 ELOA3CA0A087WX78 387 aaPredicted RBP8.93□□□□□ -0.98
USP3-218ENST00000560202 MDFIC2A0A1B0GVS7 189 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 CGB1A6NKQ9 187 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 CST7O76096 145 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 CA2P00918 260 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 RPL27AP46776 148 aaKnown RBP8.93□□□□□ -0.98
USP3-218ENST00000560202 SULT1A1P50225 295 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 SSBP2P81877 361 aaPredicted RBP8.93□□□□□ -0.98
USP3-218ENST00000560202 BAXQ07812 192 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 TMEM267Q0VDI3 215 aaPredicted RBP8.93□□□□□ -0.98
USP3-218ENST00000560202 TMEM14EPQ6UXP3 125 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 Q8N9W7 124 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 LFNGQ8NES3 379 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 OR10W1Q8NGF6 305 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 BSCL2Q96G97 398 aaPredicted RBP8.93□□□□□ -0.98
USP3-218ENST00000560202 PBDC1Q9BVG4 233 aa8.93□□□□□ -0.98
USP3-218ENST00000560202 TEX15Q9BXT5 2789 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 A0A1W2PN81 502 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 C7orf77A4D0Y5 90 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 SEC14L6B5MCN3 397 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 INS-IGF2F8WCM5 200 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 H3BUX3 64 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 METTL15P1P0C7V9 234 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 CHRNA7P36544 502 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 TAS2R60P59551 318 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 RPP30P78346 268 aaKnown RBP8.92□□□□□ -0.98
USP3-218ENST00000560202 REC114Q7Z4M0 266 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 RBM14Q96PK6 669 aaKnown RBP8.92□□□□□ -0.98
USP3-218ENST00000560202 SMIM3Q9BZL3 60 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 YAE1D1Q9NRH1 226 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 GAR1Q9NY12 217 aaKnown RBP8.92□□□□□ -0.98
USP3-218ENST00000560202 FBXL17Q9UF56 701 aa8.92□□□□□ -0.98
USP3-218ENST00000560202 FLNAP21333 2647 aaKnown RBP8.92□□□□□ -0.98
USP3-218ENST00000560202 A6NDX4 124 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 C15orf62A8K5M9 175 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 CNIH1O95406 144 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 HIST1H1BP16401 226 aaKnown RBP8.91□□□□□ -0.98
USP3-218ENST00000560202 PKIAP61925 76 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 ERHP84090 104 aaKnown RBP8.91□□□□□ -0.98
USP3-218ENST00000560202 ZNF562Q6V9R5 426 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 SPNS3Q6ZMD2 512 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 IL17RELQ6ZVW7 336 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 TMEM219Q86XT9 240 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 TMEM217Q8N7C4 229 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 SLC24A4Q8NFF2 622 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 SRSF12Q8WXF0 261 aaKnown RBP8.91□□□□□ -0.98
USP3-218ENST00000560202 RASL11BQ9BPW5 248 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 SLC25A33Q9BSK2 321 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 ABCA1O95477 2261 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 CXorf65A6NEN9 183 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 TSTD3H0UI37 97 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 NDUFS6O75380 124 aaKnown RBP8.91□□□□□ -0.98
USP3-218ENST00000560202 HLA-DRB1P01911 266 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 CX3CL1P78423 397 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 WT1-ASQ06250 92 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 ARL16Q0P5N6 197 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 FXYD3Q14802 87 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 LY6EQ16553 131 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 AWAT1Q58HT5 328 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 HAPLN4Q86UW8 402 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 OR5C1Q8NGR4 320 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 TMEM231Q9H6L2 316 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 WFDC1Q9HC57 220 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 PITPNC1Q9UKF7 332 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 MOB4Q9Y3A3 225 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 NOTCH2Q04721 2471 aa8.91□□□□□ -0.98
USP3-218ENST00000560202 OTOGQ6ZRI0 2925 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 A0A087WWC5 75 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 IGLC7A0M8Q6 106 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 PMS2P5A8MQ11 134 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 TEX22C9J3V5 150 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 TSPAN15O95858 294 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 IGHV4-59P01825 116 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 SEC11BP0C7V7 166 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 OR13C7P0DN81 318 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 NPY1RP25929 384 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 SRP14P37108 136 aaKnown RBP8.9□□□□□ -0.98
USP3-218ENST00000560202 SNCAP37840 140 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 IER3P46695 156 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 HBG1P69891 147 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms