RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RNF152Q8N8N0 203 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 OR1P1Q8NH06 330 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 MYOZ3Q8TDC0 251 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 ZNF414Q96IQ9 312 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 HIPK2Q9H2X6 1198 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 HEYLQ9NQ87 328 aaPredicted RBP7.3□□□□□ -1.24
HERC1-206ENST00000559996 ZFP57Q9NU63 452 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 MRPL36Q9P0J6 103 aaKnown RBP7.3□□□□□ -1.24
HERC1-206ENST00000559996 TNFSF18Q9UNG2 199 aa7.3□□□□□ -1.24
HERC1-206ENST00000559996 FBN1P35555 2871 aaKnown RBP7.3□□□□□ -1.24
HERC1-206ENST00000559996 JMJD1CQ15652 2540 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 TMEM89A2RUT3 159 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 CLPSL1A2RUU4 121 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 E5RGE8 158 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 F8W735 103 aaPredicted RBP7.29□□□□□ -1.24
HERC1-206ENST00000559996 K7EIM0 57 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 NDUFB8O95169 186 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 LY86O95711 162 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 RLN2P04090 185 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 CRYBA1P05813 215 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 NPY1RP25929 384 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 DEFA5Q01523 94 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 FGL1Q08830 312 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 HIST2H2BDQ6DRA6 164 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 LAMTOR1Q6IAA8 161 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 SLC24A4Q8NFF2 622 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 ABHD5Q8WTS1 349 aa7.29□□□□□ -1.24
HERC1-206ENST00000559996 CIB3Q96Q77 187 aaPredicted RBP7.29□□□□□ -1.24
HERC1-206ENST00000559996 HMSDA8MTL9 139 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 IFNA10P01566 189 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 METTL15P1P0C7V9 234 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 CXCL2P19875 107 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 RAB9AP51151 201 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 ATP5IP56385 69 aaPredicted RBP7.28□□□□□ -1.24
HERC1-206ENST00000559996 RPL23AP62750 156 aaKnown RBP7.28□□□□□ -1.24
HERC1-206ENST00000559996 EWSR1Q01844 656 aaKnown RBP eCLIP7.28□□□□□ -1.24
HERC1-206ENST00000559996 LGALSLQ3ZCW2 172 aaPredicted RBP7.28□□□□□ -1.24
HERC1-206ENST00000559996 SLC25A24Q6NUK1 477 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 ZNF546Q86UE3 836 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 KLHDC1Q8N7A1 406 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 OR2T6Q8NHC8 308 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 THAP6Q8TBB0 222 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 MS4A10Q96PG2 267 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 AQP10Q96PS8 301 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 WFDC1Q9HC57 220 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 ENY2Q9NPA8 101 aa7.28□□□□□ -1.24
HERC1-206ENST00000559996 STRAPQ9Y3F4 350 aaKnown RBP7.28□□□□□ -1.24
HERC1-206ENST00000559996 PSMB11A5LHX3 300 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 H3BUA1 57 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 L7N2F9 121 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 OR2J3O76001 311 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 CST7O76096 145 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 RPLP1P05386 114 aaKnown RBP7.27□□□□□ -1.25
HERC1-206ENST00000559996 ELANEP08246 267 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 RPL12P30050 165 aaKnown RBP7.27□□□□□ -1.25
HERC1-206ENST00000559996 SNCAP37840 140 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 VAMP2P63027 116 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 CD69Q07108 199 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 FOXE3Q13461 319 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 TEX38Q6PEX7 206 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 ETV3LQ6ZN32 361 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 CENPVQ7Z7K6 275 aaPredicted RBP7.27□□□□□ -1.25
HERC1-206ENST00000559996 NOXA1Q86UR1 476 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 ZNF491Q8N8L2 437 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 OR5AU1Q8NGC0 362 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 OR4F5Q8NH21 305 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 RNASEH2CQ8TDP1 164 aaKnown RBP7.27□□□□□ -1.25
HERC1-206ENST00000559996 SCARB1Q8WTV0 552 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 DCUN1D4Q92564 292 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 RNF114Q9Y508 228 aa7.27□□□□□ -1.25
HERC1-206ENST00000559996 SETD2Q9BYW2 2564 aaPredicted RBP7.27□□□□□ -1.25
HERC1-206ENST00000559996 IGKV1OR2-108A0A075B7D4 117 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 FXYD6-FXYD2A0A087WZ82 144 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 IGHV3-21A0A0B4J1V1 117 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 MFSD2BA6NFX1 497 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 ADARB2-AS1A8MUL3 147 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 MT-CO2P00403 227 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 IGHV3-48P01763 117 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 PET100P0DJ07 73 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 CD28P10747 220 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 PVALBP20472 110 aaPredicted RBP7.26□□□□□ -1.25
HERC1-206ENST00000559996 SULT1A1P50225 295 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 CAV2P51636 162 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 NKX2-5P52952 324 aaPredicted RBP7.26□□□□□ -1.25
HERC1-206ENST00000559996 SUB1P53999 127 aaKnown RBP eCLIP7.26□□□□□ -1.25
HERC1-206ENST00000559996 RPP30P78346 268 aaKnown RBP7.26□□□□□ -1.25
HERC1-206ENST00000559996 RHOGP84095 191 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 GAMTQ14353 236 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 VWC2Q2TAL6 325 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 C18orf65Q6ZTR6 163 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 GON7Q9BXV9 100 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 CYTL1Q9NRR1 136 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 FBXL7Q9UJT9 491 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 HSPB11Q9Y547 144 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 S4R3C0 116 aa7.26□□□□□ -1.25
HERC1-206ENST00000559996 IGKV1D-37A0A075B6S9 117 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 A6NJY4 79 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 BOLA2-SMG1P6H3BVE0 249 aa7.25□□□□□ -1.25
HERC1-206ENST00000559996 PFDN1O60925 122 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms