RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MYEOVQ96EZ4 313 aa11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 TMEM126AQ9H061 195 aa11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 PILRBQ9UKJ0 227 aa11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 NEUROG3Q9Y4Z2 214 aa11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 KIF26BQ2KJY2 2108 aa11.71□□□□□ -0.53
CSPG4P12-202ENST00000559989 TMEM190Q8WZ59 177 aa11.71□□□□□ -0.54
CSPG4P12-202ENST00000559989 ABCA3Q99758 1704 aa11.71□□□□□ -0.54
CSPG4P12-202ENST00000559989 CD33P20138 364 aa11.71□□□□□ -0.54
CSPG4P12-202ENST00000559989 ZNF721Q8TF20 911 aa11.71□□□□□ -0.54
CSPG4P12-202ENST00000559989 FAM60AQ9NP50 221 aa11.71□□□□□ -0.54
CSPG4P12-202ENST00000559989 IFITM1P13164 125 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 C9orf40Q8IXQ3 194 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 PLPPR1Q8TBJ4 325 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 A0A0G2JMM0 328 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 A0A1W2PPB8 328 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 KIR3DP1A8MWS1 328 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 ERVH48-1M5A8F1 160 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 FHL5Q5TD97 284 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 KLF14Q8TD94 323 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 Q96M66 194 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 VN1R4Q7Z5H5 301 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 ZNF703Q9H7S9 590 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 SP9P0CG40 484 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 COL11A1P12107 1806 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 SELLP14151 372 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 ATP5G3P48201 142 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 UBL5Q9BZL1 73 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 NPDC1Q9NQX5 325 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 TMEM8BA6NDV4 472 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 NPIPB13A6NJU9 1138 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 CCL20P78556 96 aa11.7□□□□□ -0.54
CSPG4P12-202ENST00000559989 PRSS23O95084 383 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 CELA2BP08218 269 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 H2BFSP57053 126 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 SPRED2Q7Z698 418 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 BCL6BQ8N143 479 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 MYMXA0A1B0GTQ4 84 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 PGFP49763 221 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 C5orf47Q569G3 176 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 OR13A1Q8NGR1 328 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 LHX2P50458 406 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 C6orf226Q5I0X4 101 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 ZNF114Q8NC26 417 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 DSCR8Q96T75 97 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 OSTCQ9NRP0 149 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 LOC102723996A0A087X1L8 192 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 TNFSF13O75888 250 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 PMVKQ15126 192 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 FOXL1Q12952 345 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 SS18Q15532 418 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 SLC25A47Q6Q0C1 308 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 A6NNC1 897 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 PVRIGQ6DKI7 326 aa11.69□□□□□ -0.54
CSPG4P12-202ENST00000559989 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 MIR17HGQ75NE6 70 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 DPM3Q9P2X0 92 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 RPL23P62829 140 aaKnown RBP11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 DDX60LQ5H9U9 1706 aaKnown RBP11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 IFITM2Q01629 132 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 TRAV14DV4A0A0A6YYC5 116 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 A8MXK9 166 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 S4R3C0 116 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 HRKO00198 91 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 IGHG3P01860 377 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 COX5BP10606 129 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 APOBEC3AP31941 199 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 RPL39P5Q59GN2 51 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 UPK2O00526 184 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 C1orf100Q5SVJ3 147 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 FBXL15Q9H469 300 aa11.68□□□□□ -0.54
CSPG4P12-202ENST00000559989 IGHV1-45A0A0A0MS14 117 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 C9JAW5 83 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 OVOL1O14753 267 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 SCN7AQ01118 1682 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 LOC105371267A0A1B0GV96 52 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 ZNF708P17019 499 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 NEU4Q8WWR8 484 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 CFHR5Q9BXR6 569 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 NGFRP08138 427 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 UBE2CO00762 179 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 NDUFS5O43920 106 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 ADAMTSL5Q6ZMM2 481 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 ZIC4Q8N9L1 334 aa11.67□□□□□ -0.54
CSPG4P12-202ENST00000559989 A0A1W2PQF6 199 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 CLPSL1A2RUU4 121 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 IQCF6A8MYZ5 107 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 CHKB-CPT1BH3BT56 60 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 DOCK6Q96HP0 2047 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 ASPHD2Q6ICH7 369 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 RASL11AQ6T310 242 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 ZNRF1Q8ND25 227 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 PLA2G2FQ9BZM2 168 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 CCL4P13236 92 aa11.66□□□□□ -0.54
CSPG4P12-202ENST00000559989 GP6Q9HCN6 339 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms