RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 NUPL2O15504 423 aaKnown RBP8.57□□□□□ -1.04
USP3-214ENST00000559718 MT-CO2P00403 227 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 TSPAN5P62079 268 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 IZUMO4Q1ZYL8 232 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 SPINK9Q5DT21 86 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 H2BFWTQ7Z2G1 175 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 SNX29P2Q8IUI4 249 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 GBGT1Q8N5D6 347 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 TMEM116Q8NCL8 245 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 MRGPRFQ96AM1 343 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 GALNT14Q96FL9 552 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 TSC22D3Q99576 134 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 SSBP4Q9BWG4 385 aaPredicted RBP8.57□□□□□ -1.04
USP3-214ENST00000559718 COMMD3Q9UBI1 195 aa8.57□□□□□ -1.04
USP3-214ENST00000559718 MFAP4P55083 255 aa8.56□□□□□ -1.04
USP3-214ENST00000559718 NCS1P62166 190 aa8.56□□□□□ -1.04
USP3-214ENST00000559718 RELQ04864 619 aaPredicted RBP8.56□□□□□ -1.04
USP3-214ENST00000559718 PINX1Q96BK5 328 aaKnown RBP8.56□□□□□ -1.04
USP3-214ENST00000559718 OR10C1Q96KK4 312 aa8.56□□□□□ -1.04
USP3-214ENST00000559718 NXF2Q9GZY0 626 aaKnown RBP8.56□□□□□ -1.04
USP3-214ENST00000559718 M0QYG6 137 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 APOHP02749 345 aaPredicted RBP8.55□□□□□ -1.04
USP3-214ENST00000559718 PRCDQ00LT1 54 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 FAM90A2PQ658T7 463 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 LPCAT3Q6P1A2 487 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 ZNF114Q8NC26 417 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 OR4A16Q8NH70 328 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 TXN2Q99757 166 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 CSTL1Q9H114 145 aa8.55□□□□□ -1.04
USP3-214ENST00000559718 FAM212BQ9NTI7 297 aaPredicted RBP8.55□□□□□ -1.04
USP3-214ENST00000559718 TRAV14DV4A0A0A6YYC5 116 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 IGHV3-66A0A0C4DH42 116 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 GNG7O60262 68 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 HPGDSO60760 199 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 APOA1P02647 267 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 ATF4P18848 351 aaPredicted RBP8.54□□□□□ -1.04
USP3-214ENST00000559718 ELK1P19419 428 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 PI3P19957 117 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 S100GP29377 79 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 RCVRNP35243 200 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 UCP3P55916 312 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 HSPE1P61604 102 aaKnown RBP8.54□□□□□ -1.04
USP3-214ENST00000559718 VBP1P61758 197 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 RNASE12Q5GAN4 147 aaKnown RBP8.54□□□□□ -1.04
USP3-214ENST00000559718 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 TCF24Q7RTU0 167 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 RPP25LQ8N5L8 163 aaKnown RBP8.54□□□□□ -1.04
USP3-214ENST00000559718 PHLDA1Q8WV24 401 aaPredicted RBP8.54□□□□□ -1.04
USP3-214ENST00000559718 ST8SIA2Q92186 375 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 SCPEP1Q9HB40 452 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 KLK5Q9Y337 293 aaPredicted RBP8.54□□□□□ -1.04
USP3-214ENST00000559718 KMT2AQ03164 3969 aa8.54□□□□□ -1.04
USP3-214ENST00000559718 A0A087WXM4 84 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 SMIM31A0A1B0GVY4 71 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 MPTX1A8MV57 137 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 DEDDO75618 318 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 IGKV1-5P01602 117 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 ERHP84090 104 aaKnown RBP8.53□□□□□ -1.04
USP3-214ENST00000559718 FAM24BQ8N5W8 94 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 TMEM217Q8N7C4 229 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 TP53RKQ96S44 253 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 RARRES2Q99969 163 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 FUNDC2Q9BWH2 189 aa8.53□□□□□ -1.04
USP3-214ENST00000559718 C6orf62Q9GZU0 229 aaPredicted RBP8.53□□□□□ -1.04
USP3-214ENST00000559718 A0A0B4J293 547 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 DEFB4AO15263 64 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 DFFBO76075 338 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 P0C879 139 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 PGAM2P15259 253 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 PIGPP57054 158 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 NANOS2P60321 138 aaKnown RBP8.52□□□□□ -1.05
USP3-214ENST00000559718 LEMD1Q68G75 181 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 OR11H2Q8NH07 326 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 CMTM3Q96MX0 182 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 VSIRQ9H7M9 311 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 VCX3AQ9NNX9 186 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 MRPL36Q9P0J6 103 aaKnown RBP8.52□□□□□ -1.05
USP3-214ENST00000559718 KLK11Q9UBX7 282 aa8.52□□□□□ -1.05
USP3-214ENST00000559718 PUS1Q9Y606 427 aaKnown RBP eCLIP8.52□□□□□ -1.05
USP3-214ENST00000559718 FRAS1Q86XX4 4008 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 AGRNO00468 2067 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 A0A1B0GU03 582 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 ST8SIA3O43173 380 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 TMEM50AO95807 157 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 GHRHP01286 108 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 NPBWR1P48145 328 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 CMC4P56277 68 aaPredicted RBP8.51□□□□□ -1.05
USP3-214ENST00000559718 DEFB131AP59861 70 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 RND3P61587 244 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 MLANAQ16655 118 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 SP6Q3SY56 376 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 LHFPL1Q86WI0 220 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 DUSP18Q8NEJ0 188 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 GATAD1Q8WUU5 269 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 GINS3Q9BRX5 216 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 MS4A6AQ9H2W1 248 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 FBXL17Q9UF56 701 aa8.51□□□□□ -1.05
USP3-214ENST00000559718 A0A0G2JRQ6 117 aa8.5□□□□□ -1.05
USP3-214ENST00000559718 FAM25AB3EWG3 89 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms