RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 NCALDP61601 193 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 HSPE1P61604 102 aaKnown RBP1.16□□□□□ -2.22
GABPB1-209ENST00000559100 GNG5P63218 68 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 SLC38A11Q08AI6 406 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 KHDC3LQ587J8 217 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 AKR1C8PQ5T2L2 129 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 Q6Q795 121 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 AAED1Q7RTV5 226 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 HIST3H2BBQ8N257 126 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 STX19Q8N4C7 294 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 LINC00471Q8N535 108 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF439Q8NDP4 499 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 PHOSPHO2Q8TCD6 241 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 RASSF5Q8WWW0 418 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 C11orf40Q8WZ69 217 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 ZHX1-C8orf76Q96EF9 292 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 C2orf50Q96LR7 162 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 GPER1Q99527 375 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 HOPXQ9BPY8 73 aaPredicted RBP1.16□□□□□ -2.22
GABPB1-209ENST00000559100 C20orf27Q9GZN8 174 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 CHST6Q9GZX3 395 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 CST9LQ9H4G1 147 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 PARVBQ9HBI1 364 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 OSTCQ9NRP0 149 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 MED29Q9NX70 200 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 SS18L2Q9UHA2 77 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 SSR3Q9UNL2 185 aa1.16□□□□□ -2.22
GABPB1-209ENST00000559100 SIPA1L1O43166 1804 aa1.15□□□□□ -2.22
GABPB1-209ENST00000559100 A0A0D9SEW6 157 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 H3BRN7 92 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 H7C1C5 153 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 AIPO00170 330 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 CYB5BO43169 146 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 IFNA7P01567 189 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 UBBP0CG47 229 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 P0DMU3 169 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 FAM231AP0DMU4 169 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 FAM231CP0DMU5 169 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 PHBP35232 272 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 PIGPP57054 158 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 CDC42P60953 191 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 YPEL3P61236 119 aaPredicted RBP1.15□□□□□ -2.23
GABPB1-209ENST00000559100 LCN6P62502 163 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 GNG3P63215 75 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 SUPT4H1P63272 117 aaKnown RBP1.15□□□□□ -2.23
GABPB1-209ENST00000559100 DR1Q01658 176 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 KISS1Q15726 138 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 SNCBQ16143 134 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 FAM27BQ5VT28 67 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 Q6ZTI0 123 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 MIR17HGQ75NE6 70 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 LYG2Q86SG7 212 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 CROCCP2Q86T23 111 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 IFT20Q8IY31 132 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 OR4E2Q8NGC2 313 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 OR5A1Q8NGJ0 315 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 OR8D4Q8NGM9 314 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 SERPINI1Q99574 410 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 Q9BRP9 147 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 GINS3Q9BRX5 216 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 LCE3DQ9BYE3 92 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 MRPL40Q9NQ50 206 aaKnown RBP1.15□□□□□ -2.23
GABPB1-209ENST00000559100 CKLFQ9UBR5 152 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 UFC1Q9Y3C8 167 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 DOCK5Q9H7D0 1870 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 MIA2Q96PC5 1412 aa1.15□□□□□ -2.23
GABPB1-209ENST00000559100 RALGAPA2Q2PPJ7 1873 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 EIF3AQ14152 1382 aaKnown RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 ZNF407Q9C0G0 2248 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 TRBV19A0A075B6N1 114 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 TRBV10-2A0A0K0K1G8 114 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 ZNF860A6NHJ4 632 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 SIGLEC16A6NMB1 481 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 BUB1B-PAK6H3BSN5 160 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 SDCBPO00560 298 aaPredicted RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 PLXNB1O43157 2135 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 PGLYRP1O75594 196 aaPredicted RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 OR2J2O76002 312 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 OR4E1P0C645 316 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 METTL15P1P0C7V9 234 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 LGALS3P17931 250 aaKnown RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 SERPINB1P30740 379 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 SRP14P37108 136 aaKnown RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 ATP5G3P48201 142 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 ZNF80P51504 273 aaPredicted RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 FXYD2P54710 66 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 AQP4P55087 323 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 EIF5AP63241 154 aaKnown RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 HES1Q14469 280 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 SS18Q15532 418 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 TSNQ15631 228 aaKnown RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 ZNF791Q3KP31 576 aaPredicted RBP1.14□□□□□ -2.23
GABPB1-209ENST00000559100 TMEM155Q4W5P6 130 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 BCL2L15Q5TBC7 163 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 LCA10Q71F78 164 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 SMIM15Q7Z3B0 74 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 SMIM20Q8N5G0 67 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 TERB2Q8NHR7 220 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 TXNDC17Q9BRA2 123 aa1.14□□□□□ -2.23
GABPB1-209ENST00000559100 TMEM70Q9BUB7 260 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms