RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 IL6RP08887 468 aaPredicted RBP8.19□□□□□ -1.1
TRPM1-208ENST00000558768 TIMP3P35625 211 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 ZNF645Q8N7E2 425 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 THAP10Q9P2Z0 257 aaPredicted RBP8.19□□□□□ -1.1
TRPM1-208ENST00000558768 LTBP4Q8N2S1 1624 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 M0R1B8 84 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 SMAD7O15105 426 aaKnown RBP8.19□□□□□ -1.1
TRPM1-208ENST00000558768 NAPSAO96009 420 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 ORMDL2Q53FV1 153 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 BMPERQ8N8U9 685 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 PEBP1P30086 187 aaKnown RBP8.19□□□□□ -1.1
TRPM1-208ENST00000558768 RBM3P98179 157 aaKnown RBP8.19□□□□□ -1.1
TRPM1-208ENST00000558768 ZNF525Q8N782 197 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 TMEM52Q8NDY8 209 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 C8orf44Q96CB5 159 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 FOXQ1Q9C009 403 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 RNASE7Q9H1E1 156 aaKnown RBP8.19□□□□□ -1.1
TRPM1-208ENST00000558768 SPINT1O43278 529 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 SRFP11831 508 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 CD33P20138 364 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 SRSF1Q07955 248 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRPM1-208ENST00000558768 CTHRC1Q96CG8 243 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 TM4SF19Q96DZ7 209 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 FMC1Q96HJ9 113 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 JMJD8Q96S16 334 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 PLA2G3Q9NZ20 509 aa8.19□□□□□ -1.1
TRPM1-208ENST00000558768 TRAV26-1A0A087WT03 109 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 CISD3P0C7P0 127 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 SMIM10L1P0DMW3 83 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 SUPT4H1P63272 117 aaKnown RBP8.18□□□□□ -1.1
TRPM1-208ENST00000558768 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 ZNF114Q8NC26 417 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 ZNF296Q8WUU4 475 aaPredicted RBP8.18□□□□□ -1.1
TRPM1-208ENST00000558768 SMIM10Q96HG1 83 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 PLXNB2O15031 1838 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 OR2H2O95918 312 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 CRYBA4P53673 196 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 OVOL2Q9BRP0 275 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 H3BMM0 161 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 C9orf50Q5SZB4 431 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 OR9G1Q8NH87 305 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 UBE2WQ96B02 151 aa8.18□□□□□ -1.1
TRPM1-208ENST00000558768 HGFACQ04756 655 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 PTCRAQ6ISU1 281 aaPredicted RBP8.17□□□□□ -1.1
TRPM1-208ENST00000558768 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 INO80CQ6PI98 192 aaPredicted RBP8.17□□□□□ -1.1
TRPM1-208ENST00000558768 RPRMLQ8N4K4 120 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 LYPD6BQ8NI32 183 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 TSKUQ8WUA8 353 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 SF3B5Q9BWJ5 86 aaKnown RBP8.17□□□□□ -1.1
TRPM1-208ENST00000558768 A0A1W2PQD3 144 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 C22orf46C9J442 243 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 DXOO77932 396 aaKnown RBP8.17□□□□□ -1.1
TRPM1-208ENST00000558768 IL11P20809 199 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 WDR82Q6UXN9 313 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 LHFPL1Q86WI0 220 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 CHAC1Q9BUX1 264 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 POLR2AP24928 1970 aaKnown RBP8.17□□□□□ -1.1
TRPM1-208ENST00000558768 CACNA1IQ9P0X4 2223 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 IGHV2-70DA0A0C4DH43 119 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 ZIC3O60481 467 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 Q0VG73 95 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 R4GN57 208 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 TRPM6Q9BX84 2022 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 PLXNA3P51805 1871 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 PRSS12P56730 875 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 HERV-K104P63124 156 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 ABHD12Q8N2K0 398 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 RNASE8Q8TDE3 154 aaKnown RBP8.17□□□□□ -1.1
TRPM1-208ENST00000558768 WFDC1Q9HC57 220 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 LOXL2Q9Y4K0 774 aa8.17□□□□□ -1.1
TRPM1-208ENST00000558768 IGKV3-7A0A075B6H7 116 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 LIPT2A6NK58 231 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 VWC2LB2RUY7 222 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 PATE4P0C8F1 98 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 DRAM1Q8N682 238 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 STPG4Q8N801 248 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 CLEC7AQ9BXN2 247 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 ZNF688P0C7X2 276 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 COX7A1P24310 79 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 TNFAIP6P98066 277 aaPredicted RBP8.16□□□□□ -1.1
TRPM1-208ENST00000558768 ZP4Q12836 540 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 UTF1Q5T230 341 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 FBXL15Q9H469 300 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 A0A1W2PS18 150 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 SHISA8B8ZZ34 492 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 MGST3O14880 152 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 EBLN2Q6P2I7 272 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 GTSCR1Q86UQ5 136 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 Q96M66 194 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 PILRAQ9UKJ1 303 aa8.16□□□□□ -1.1
TRPM1-208ENST00000558768 A0A1W2PPM0 123 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 HRKO00198 91 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 NXPH1P58417 271 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 C5orf47Q569G3 176 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 ZC2HC1BQ5TFG8 222 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 ZNF818PQ6ZRF7 136 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms