RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ZNF688P0C7X2 276 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 HTN3P15516 51 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 HIST1H1DP16402 221 aaKnown RBP4.76□□□□□ -1.65
LRRC28-207ENST00000558500 GNB3P16520 340 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 TALDO1P37837 337 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 EMP1P54849 157 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 WNT4P56705 351 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 CLDN12P56749 244 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 TAS2R31P59538 309 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 ST3GAL4Q11206 333 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 OXA1LQ15070 435 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 POU2AF1Q16633 256 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 MZT2AQ6P582 158 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 TOMM20LQ6UXN7 152 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 SPAG16Q8N0X2 631 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 PYDC1Q8WXC3 89 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 FRZBQ92765 325 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 LSM10Q969L4 123 aaKnown RBP4.76□□□□□ -1.65
LRRC28-207ENST00000558500 TRIM63Q969Q1 353 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 FAM3DQ96BQ1 224 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 GPHA2Q96T91 129 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 GINS3Q9BRX5 216 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 NIPSNAP3BQ9BS92 247 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 ATG101Q9BSB4 218 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 C1QTNF4Q9BXJ3 329 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 NXF2Q9GZY0 626 aaKnown RBP4.76□□□□□ -1.65
LRRC28-207ENST00000558500 DKK2Q9UBU2 259 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 A0A075B6Q4 140 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 TMEM272A0A1B0GTI8 110 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 ERICH4A6NGS2 130 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 ZNF705FA8MVS1 300 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 MYL12BO14950 172 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 RBFOX2O43251 390 aaKnown RBP eCLIP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 TNFSF12O43508 249 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 HPRT1P00492 218 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 ZNF705DP0CH99 300 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 ZNF705BP0CI00 300 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 NQO2P16083 231 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 BTF3P20290 206 aaKnown RBP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 FGF9P31371 208 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 XGP55808 180 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 NUTF2P61970 127 aaKnown RBP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 RCN1Q15293 331 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 MLANAQ16655 118 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 C2orf76Q3KRA6 126 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 FAM222AQ5U5X8 452 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 ZNF705AQ6ZN79 300 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 KRTAP19-1Q8IUB9 90 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 C15orf53Q8NAA6 179 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 STXBP6Q8NFX7 210 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 OR1L8Q8NGR8 309 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 OR10R2Q8NGX6 335 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 DCANP1Q8TF63 244 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 SLC25A46Q96AG3 418 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 RAB40CQ96S21 281 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 TXN2Q99757 166 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 C9orf16Q9BUW7 83 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 DCSTAMPQ9H295 470 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 TMEM231Q9H6L2 316 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 NDUFA4L2Q9NRX3 87 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 XCL2Q9UBD3 114 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 RAB22AQ9UL26 194 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 AK6Q9Y3D8 172 aaKnown RBP4.75□□□□□ -1.65
LRRC28-207ENST00000558500 RFNGQ9Y644 331 aa4.75□□□□□ -1.65
LRRC28-207ENST00000558500 SMIM9A6NGZ8 99 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 I3L2K1 104 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 DTYMKP23919 212 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 GADD45AP24522 165 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 MFAP4P55083 255 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 MSMO1Q15800 293 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 GAGE13Q4V321 117 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 NANOGP1Q8N7R0 232 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 ZNF555Q8NEP9 628 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 NUDT10Q8NFP7 164 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 OR1P1Q8NH06 330 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 NUDT11Q96G61 164 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 HINT2Q9BX68 163 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 CCL28Q9NRJ3 127 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 FAM30AQ9NZY2 134 aa4.74□□□□□ -1.65
LRRC28-207ENST00000558500 A0A087WWL8 130 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 A0A1W2PS18 150 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 SULT1C2O00338 296 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 ATP8B1O43520 1251 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 GNG7O60262 68 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 MT-CO2P00403 227 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 IGHV3-48P01763 117 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 RANBP1P43487 201 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 RAB32Q13637 225 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 PSMG4Q5JS54 123 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 CNIH2Q6PI25 160 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 GSG1LQ6UXU4 331 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 ZNF600Q6ZNG1 722 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 DMBX1Q8NFW5 382 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 PLEKHA2Q9HB19 425 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 COMMD9Q9P000 198 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 MDFICQ9P1T7 246 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 ELF5Q9UKW6 265 aaPredicted RBP4.73□□□□□ -1.65
LRRC28-207ENST00000558500 PUS1Q9Y606 427 aaKnown RBP eCLIP4.73□□□□□ -1.65
LRRC28-207ENST00000558500 NACAE9PAV3 2078 aa4.73□□□□□ -1.65
LRRC28-207ENST00000558500 IGHV3OR16-12A0A075B7B8 117 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms