RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 C4orf46Q504U0 113 aa9.46□□□□□ -0.9
SMAD3-205ENST00000558428 ACSM6Q6P461 480 aa9.46□□□□□ -0.9
SMAD3-205ENST00000558428 ELOVL1Q9BW60 279 aa9.46□□□□□ -0.9
SMAD3-205ENST00000558428 ZC4H2Q9NQZ6 224 aa9.46□□□□□ -0.9
SMAD3-205ENST00000558428 CACFD1Q9UGQ2 172 aa9.46□□□□□ -0.9
SMAD3-205ENST00000558428 TBC1D24Q9ULP9 559 aa9.46□□□□□ -0.9
SMAD3-205ENST00000558428 A0A1B0GU03 582 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 OR2C1O95371 312 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 HOXB5P09067 269 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 RNASE2P10153 161 aaKnown RBP9.45□□□□□ -0.9
SMAD3-205ENST00000558428 SUB1P53999 127 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMAD3-205ENST00000558428 DHRS2Q13268 280 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 ASAH1Q13510 395 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 PDLIM3Q53GG5 364 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-205ENST00000558428 MZT2BQ6NZ67 158 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 REC114Q7Z4M0 266 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 LYG2Q86SG7 212 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 OR9G4Q8NGQ1 327 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 OR1S1Q8NH92 325 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 COQ8AQ8NI60 647 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 SCARB1Q8WTV0 552 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 PINX1Q96BK5 328 aaKnown RBP9.45□□□□□ -0.9
SMAD3-205ENST00000558428 OR4C12Q96R67 309 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 HEYLQ9NQ87 328 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-205ENST00000558428 AURKAIP1Q9NWT8 199 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-205ENST00000558428 C21orf62Q9NYP8 219 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 ZMAT5Q9UDW3 170 aaKnown RBP9.45□□□□□ -0.9
SMAD3-205ENST00000558428 TMED3Q9Y3Q3 217 aa9.45□□□□□ -0.9
SMAD3-205ENST00000558428 TRAV6A0A075B6T7 132 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 FAM240BA0A1B0GVZ2 78 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 OR2T8A6NH00 312 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 I3L2K1 104 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 MT-CO2P00403 227 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 TNFRSF9Q07011 255 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 Q56UQ5 140 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 PLET1Q6UQ28 207 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 UBAC2Q8NBM4 344 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 NUDT15Q9NV35 164 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 PEMTQ9UBM1 199 aa9.44□□□□□ -0.9
SMAD3-205ENST00000558428 CORTO00230 105 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 TGOLN2O43493 480 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 IGHV3-48P01763 117 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 HTR2BP41595 481 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 MFAP4P55083 255 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 IFITM3Q01628 133 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 FAM106AQ4KMX7 169 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 GGNBP1Q5YKI7 109 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 GPHB5Q86YW7 130 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 OR52B4Q8NGK2 314 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 BSCL2Q96G97 398 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-205ENST00000558428 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 HIPK2Q9H2X6 1198 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 RBKSQ9H477 322 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 HSPB7Q9UBY9 170 aa9.43□□□□□ -0.9
SMAD3-205ENST00000558428 IGHV3-35A0A0C4DH35 117 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 F8W735 103 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-205ENST00000558428 PITX3O75364 302 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 ADAP1O75689 374 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 SLC25A6P12236 298 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 BSXQ3C1V8 233 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 PVRIGQ6DKI7 326 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 C11orf87Q6NUJ2 197 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 SPSB3Q6PJ21 355 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 IL34Q6ZMJ4 242 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 HAPLN4Q86UW8 402 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 SLC24A4Q8NFF2 622 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 ENKURQ8TC29 256 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 DTD1Q8TEA8 209 aa9.42□□□□□ -0.9
SMAD3-205ENST00000558428 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
SMAD3-205ENST00000558428 WI2-2373I1.2A0A1W2PRP0 233 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 LGALS9O00182 355 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 LY86O95711 162 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 IFNA21P01568 189 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 CSN3P07498 182 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 H2AFB2P0C5Z0 115 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 NPY1RP25929 384 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 OPRK1P41145 380 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 C2orf83Q53S99 150 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 MITD1Q8WV92 249 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 TXN2Q99757 166 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 CHRDL1Q9BU40 450 aa9.41□□□□□ -0.9
SMAD3-205ENST00000558428 ZNF256Q9Y2P7 627 aaPredicted RBP9.41□□□□□ -0.9
SMAD3-205ENST00000558428 C2orf70A6NJV1 201 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 MPTX1A8MV57 137 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 K7EIL1 84 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 NUPL2O15504 423 aaKnown RBP9.4□□□□□ -0.9
SMAD3-205ENST00000558428 GNG7O60262 68 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 MED6O75586 246 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 IFNA10P01566 189 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 SPNP16150 400 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-205ENST00000558428 ADMP35318 185 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 NPBWR1P48145 328 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 UNQ9165/PRO28630Q6UXU0 137 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 NOXA1Q86UR1 476 aa9.4□□□□□ -0.9
SMAD3-205ENST00000558428 DUSP18Q8NEJ0 188 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms