RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 HINT2Q9BX68 163 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 MRPL20Q9BYC9 149 aaKnown RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 TMEM133Q9H2Q1 129 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 PATZ1Q9HBE1 687 aaKnown RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 INTS1Q8N201 2190 aaKnown RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 FAM186AA6NE01 2351 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 MDFIC2A0A1B0GVS7 189 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 SRRM4A7MD48 611 aaKnown RBP6.75□□□□□ -1.33
SPG11-209ENST00000558253 PHOX2AO14813 284 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 IGHV3-7P01780 117 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 IGKV1-16P04430 117 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 TRGC1P0CF51 173 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 RNF224P0DH78 156 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 IGHV1-8P0DP01 117 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 RPS16P62249 146 aaKnown RBP6.75□□□□□ -1.33
SPG11-209ENST00000558253 GNB1P62873 340 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 GTF3C1Q12789 2109 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 KLRB1Q12918 225 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 GAMTQ14353 236 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 KIAA2026Q5HYC2 2103 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 PVRIGQ6DKI7 326 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 DUX4L9Q6RFH8 374 aaPredicted RBP6.75□□□□□ -1.33
SPG11-209ENST00000558253 ZNF114Q8NC26 417 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 C8orf46Q8TAG6 207 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 C1orf159Q96HA4 380 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 SFRP2Q96HF1 295 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 PSMG3-AS1Q96PY0 264 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 SCNM1Q9BWG6 230 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 DNAJC4Q9NNZ3 241 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 WDFY3Q8IZQ1 3526 aa6.75□□□□□ -1.33
SPG11-209ENST00000558253 OR10J4P0C629 311 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 C1QTNF9P0C862 333 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 C8orf88P0DMB2 117 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 CCL3L1P16619 93 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 NPPCP23582 126 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 BPIFB3P59826 476 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 JOSD1Q15040 202 aaPredicted RBP6.74□□□□□ -1.33
SPG11-209ENST00000558253 FAM78BQ5VT40 261 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 HIST3H2BBQ8N257 126 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 THAP8Q8NA92 274 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 OR10G8Q8NGN5 311 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 OR10D4PQ8NGN7 298 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 OR1L6Q8NGR2 347 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 OR4X1Q8NH49 305 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 SSMEM1Q8WWF3 244 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 RAB1BQ9H0U4 201 aa6.74□□□□□ -1.33
SPG11-209ENST00000558253 ZNF430Q9H8G1 570 aaPredicted RBP6.74□□□□□ -1.33
SPG11-209ENST00000558253 TRBV9A0A0B4J1U6 114 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.73□□□□□ -1.33
SPG11-209ENST00000558253 HELTA6NFD8 242 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 A8MWP6 167 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 M0R143 59 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 ACTL6BO94805 426 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 IGFBP2P18065 325 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 OR10J1P30954 320 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 ATP5G3P48201 142 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 PDLIM4P50479 330 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 UBE2G2P60604 165 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 USF2Q15853 346 aaPredicted RBP6.73□□□□□ -1.33
SPG11-209ENST00000558253 ZNF672Q499Z4 452 aaPredicted RBP6.73□□□□□ -1.33
SPG11-209ENST00000558253 GCSAMLQ5JQS6 135 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 ACTL10Q5JWF8 245 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 UTF1Q5T230 341 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 TMEM183AQ8IXX5 376 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 MUC15Q8N387 334 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 NEU4Q8WWR8 484 aaPredicted RBP6.73□□□□□ -1.33
SPG11-209ENST00000558253 FRZBQ92765 325 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 TIMD4Q96H15 378 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 SLC25A33Q9BSK2 321 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 CHRDL1Q9BU40 450 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 CLEC7AQ9BXN2 247 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 SEPSECSQ9HD40 501 aaKnown RBP6.73□□□□□ -1.33
SPG11-209ENST00000558253 RAXQ9Y2V3 346 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 MYO15AQ9UKN7 3530 aa6.73□□□□□ -1.33
SPG11-209ENST00000558253 HEATR1Q9H583 2144 aaKnown RBP6.73□□□□□ -1.33
SPG11-209ENST00000558253 TCRBV4S1A1TA0A5B7 111 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 IGLV2-23P01705 113 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 GNG4P50150 75 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 YPEL3P61236 119 aaPredicted RBP6.72□□□□□ -1.33
SPG11-209ENST00000558253 PSG5Q15238 335 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 PRSS8Q16651 343 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 TIGITQ495A1 244 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 LYPD2Q6UXB3 125 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 C1orf122Q6ZSJ8 110 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 S100A7AQ86SG5 101 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 ZCCHC24Q8N2G6 241 aaKnown RBP6.72□□□□□ -1.33
SPG11-209ENST00000558253 OR8B3Q8NGG8 313 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 OR1P1Q8NH06 330 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 SMIM12Q96EX1 92 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 PACRGQ96M98 296 aaPredicted RBP6.72□□□□□ -1.33
SPG11-209ENST00000558253 OR8B2Q96RD0 313 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 TRGV9Q99603 122 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 CTSZQ9UBR2 303 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 SH3BGRL2Q9UJC5 107 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 RNF24Q9Y225 148 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 INSIG2Q9Y5U4 225 aa6.72□□□□□ -1.33
SPG11-209ENST00000558253 FREM2Q5SZK8 3169 aa6.71□□□□□ -1.33
SPG11-209ENST00000558253 USF3Q68DE3 2245 aa6.71□□□□□ -1.34
SPG11-209ENST00000558253 IGHV2-26A0A0B4J1V2 119 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms