RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 TRGV3P03979 118 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 ELANEP08246 267 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 RAB9AP51151 201 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 TPPP2P59282 170 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 SPCS3P61009 180 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 ERHP84090 104 aaKnown RBP9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 WT1-ASQ06250 92 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 FOXE3Q13461 319 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 OXA1LQ15070 435 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 C2orf68Q2NKX9 166 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 IAH1Q2TAA2 248 aaPredicted RBP9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 NSUN5P1Q3KNT7 163 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 COMMD1Q8N668 190 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR10C1Q96KK4 312 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
HMGB1P8-201ENST00000558211 NPIPB5A8MRT5 1133 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR2J3O76001 311 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 SIX6O95475 246 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 SLC25A6P12236 298 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 CTRB1P17538 263 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 PSMB8P28062 276 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 TNFRSF9Q07011 255 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 CTRB2Q6GPI1 263 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 C11orf87Q6NUJ2 197 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 SLC25A24Q6NUK1 477 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 GSG1LQ6UXU4 331 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 ZBTB8BQ8NAP8 495 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR52E5Q8NH55 327 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR5B12Q96R08 314 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 CITED1Q99966 193 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 SRSF8Q9BRL6 282 aaKnown RBP9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 MAGT1Q9H0U3 335 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 RBKSQ9H477 322 aa9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 HEYLQ9NQ87 328 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P8-201ENST00000558211 PITX3O75364 302 aa9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 IGHV3-11P01762 117 aa9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 CRYGCP07315 174 aa9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 IAPPP10997 89 aa9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 SNCAP37840 140 aa9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 C18orf65Q6ZTR6 163 aa9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 HSD17B13Q7Z5P4 300 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 OR2C3Q8N628 320 aa9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 HSPB7Q9UBY9 170 aa9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 TSSC4Q9Y5U2 329 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P8-201ENST00000558211 IGHV3-21A0A0B4J1V1 117 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 C7orf66A4D0T2 115 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 WRBO00258 174 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 NKX2-1P43699 371 aaPredicted RBP9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 RPL23AP62750 156 aaKnown RBP9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 RHOGP84095 191 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 AARDQ4LEZ3 155 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 ZNF491Q8N8L2 437 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 KLHL30-AS1Q8NEE0 82 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 OR4D5Q8NGN0 318 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 DTD1Q8TEA8 209 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 C2orf50Q96LR7 162 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 P2RX4Q99571 388 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 HIPK2Q9H2X6 1198 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 SLA2Q9H6Q3 261 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 MGAT4CQ9UBM8 478 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 S4R3C0 116 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
HMGB1P8-201ENST00000558211 STAB1Q9NY15 2570 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 H3BUA1 57 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 SYNGR2O43760 224 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 MED6O75586 246 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 NDUFB8O95169 186 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 IGHV3-23P01764 117 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 MFAP2P55001 183 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 POLR2GP62487 172 aaKnown RBP eCLIP9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 KIAA0141Q14154 515 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 MED28Q9H204 178 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 GNB4Q9HAV0 340 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 ZFP57Q9NU63 452 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 CACFD1Q9UGQ2 172 aa9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 PAIP2BQ9ULR5 123 aaKnown RBP9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 LSM5Q9Y4Y9 91 aaKnown RBP9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 F11RQ9Y624 299 aaKnown RBP9.32□□□□□ -0.92
HMGB1P8-201ENST00000558211 IGLV11-55A0A075B6I3 123 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 FAM90A26D6RGX4 464 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 CYB5BO43169 146 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 IFNA10P01566 189 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 HIST1H1BP16401 226 aaKnown RBP9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 SUB1P53999 127 aaKnown RBP eCLIP9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 S100A10P60903 97 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 ATP5G2Q06055 141 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 PDLIM3Q53GG5 364 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 NDUFA11Q86Y39 141 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 SVIPQ8NHG7 77 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 PINX1Q96BK5 328 aaKnown RBP9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 UBE2E2Q96LR5 201 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 DUX3Q96PT4 197 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 DMRT1Q9Y5R6 373 aa9.31□□□□□ -0.92
HMGB1P8-201ENST00000558211 TRBV9A0A0B4J1U6 114 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 A0A0G2JLM5 398 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 INS-IGF2F8WCM5 200 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 SSSCA1O60232 199 aa9.3□□□□□ -0.92
HMGB1P8-201ENST00000558211 MBPP02686 304 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms