RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 EXOSC2Q13868 293 aaKnown RBP13.26□□□□□ -0.29
SNX1-203ENST00000558040 PVRIGQ6DKI7 326 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 ETFRF1Q6IPR1 90 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 SLC25A24Q6NUK1 477 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 Q6ZS46 218 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 Q8N2B8 174 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 OR5T1Q8NG75 326 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 MISP3Q96FF7 219 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 GGACTQ9BVM4 153 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 SMIM3Q9BZL3 60 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 THYN1Q9P016 225 aa13.26□□□□□ -0.29
SNX1-203ENST00000558040 HIVEP1P15822 2718 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 RPS10-NUDT3A0A1W2PQS6 291 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 G3V318 75 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 DLK1P80370 383 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 ARL16Q0P5N6 197 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 ZNF266Q14584 549 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 CLINT1Q14677 625 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 OPCMLQ14982 345 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 C19orf54Q5BKX5 351 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 HAPLN4Q86UW8 402 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 OR2T6Q8NHC8 308 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 ATP5SQ99766 215 aa13.25□□□□□ -0.29
SNX1-203ENST00000558040 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
SNX1-203ENST00000558040 PRSS46E5RG02 174 aa13.24□□□□□ -0.29
SNX1-203ENST00000558040 GPX4P36969 197 aaPredicted RBP13.24□□□□□ -0.29
SNX1-203ENST00000558040 OPRK1P41145 380 aa13.24□□□□□ -0.29
SNX1-203ENST00000558040 CACNG8Q8WXS5 425 aa13.24□□□□□ -0.29
SNX1-203ENST00000558040 BSCL2Q96G97 398 aaPredicted RBP13.24□□□□□ -0.29
SNX1-203ENST00000558040 NOL4LQ96MY1 436 aaPredicted RBP13.24□□□□□ -0.29
SNX1-203ENST00000558040 TMEM147Q9BVK8 224 aa13.24□□□□□ -0.29
SNX1-203ENST00000558040 ZNF355PQ9NSJ1 428 aa13.24□□□□□ -0.29
SNX1-203ENST00000558040 LINC00527Q9UJ94 153 aa13.24□□□□□ -0.29
SNX1-203ENST00000558040 SETXQ7Z333 2677 aaKnown RBP13.24□□□□□ -0.29
SNX1-203ENST00000558040 F8P00451 2351 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 IGLV11-55A0A075B6I3 123 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 FNDC10F2Z333 226 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 H3BUA1 57 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 JTBO76095 146 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 MFAP2P55001 183 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 EIF5AP63241 154 aaKnown RBP13.23□□□□□ -0.29
SNX1-203ENST00000558040 CD69Q07108 199 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 C19orf35Q6ZS72 473 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 ZNF471Q9BX82 626 aaPredicted RBP13.23□□□□□ -0.29
SNX1-203ENST00000558040 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
SNX1-203ENST00000558040 IFNA5P01569 189 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 PPIFP30405 207 aaKnown RBP13.22□□□□□ -0.29
SNX1-203ENST00000558040 SLC35B1P78383 322 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 KLK9Q2XQG4 91 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 TMEM95Q3KNT9 176 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 Q6ZSV7 163 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 SLC16A13Q7RTY0 426 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 SLC51BQ86UW2 128 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 SLC35E1Q96K37 410 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 KLK9Q9UKQ9 250 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 DMRT1Q9Y5R6 373 aa13.22□□□□□ -0.29
SNX1-203ENST00000558040 SMCO3A2RU48 225 aa13.21□□□□□ -0.29
SNX1-203ENST00000558040 BRI3O95415 125 aa13.21□□□□□ -0.29
SNX1-203ENST00000558040 MT-CO2P00403 227 aa13.21□□□□□ -0.29
SNX1-203ENST00000558040 PRH1P02810 166 aa13.21□□□□□ -0.29
SNX1-203ENST00000558040 VWC2Q2TAL6 325 aa13.21□□□□□ -0.29
SNX1-203ENST00000558040 FANCD2OSQ96PS1 177 aa13.21□□□□□ -0.29
SNX1-203ENST00000558040 WFDC1Q9HC57 220 aa13.21□□□□□ -0.29
SNX1-203ENST00000558040 UBE2L5PA0A1B0GUS4 154 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 TMEM89A2RUT3 159 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 SOX15O60248 233 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 CFHR3Q02985 330 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 AKR1C1Q04828 323 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 RPL7L1Q6DKI1 246 aaKnown RBP13.2□□□□□ -0.3
SNX1-203ENST00000558040 UBAC2Q8NBM4 344 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 SCGB1C1Q8TD33 95 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 PARD6GQ9BYG4 376 aaPredicted RBP13.2□□□□□ -0.3
SNX1-203ENST00000558040 SLA2Q9H6Q3 261 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 NPVFQ9HCQ7 196 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 CYTL1Q9NRR1 136 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 FBXL7Q9UJT9 491 aa13.2□□□□□ -0.3
SNX1-203ENST00000558040 ANK3Q12955 4377 aaKnown RBP13.2□□□□□ -0.3
SNX1-203ENST00000558040 TRBV9A0A0B4J1U6 114 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 PSMB11A5LHX3 300 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 FAM223BA6NKX1 122 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 I3L2K1 104 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 OR2J3O76001 311 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 NDUFA7O95182 113 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 TPT1P13693 172 aaKnown RBP13.19□□□□□ -0.3
SNX1-203ENST00000558040 RHOGP84095 191 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 FAM223AQ8IWN6 122 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 STOML3Q8TAV4 291 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 C16orf95Q9H693 158 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 FNDC4Q9H6D8 234 aaPredicted RBP13.19□□□□□ -0.3
SNX1-203ENST00000558040 SERTAD4Q9NUC0 356 aa13.19□□□□□ -0.3
SNX1-203ENST00000558040 K7EIM0 57 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 IGLV1-40P01703 118 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 IGHG4P01861 327 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 TRGV3P03979 118 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 PF4V1P10720 104 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 GAMTQ14353 236 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 ACSM6Q6P461 480 aa13.18□□□□□ -0.3
SNX1-203ENST00000558040 CENPVQ7Z7K6 275 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 890.7 ms