RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 ACSM6Q6P461 480 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 MISP3Q96FF7 219 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 MGST2Q99735 147 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 RASL11BQ9BPW5 248 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 PARP11Q9NR21 331 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 IGHV3-21A0A0B4J1V1 117 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 IGHV7-81A0A0B4J1V7 117 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 H3BUX3 64 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 RAB5CP51148 216 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 CD69Q07108 199 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 CYB5R2Q6BCY4 276 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 MRPL41Q8IXM3 137 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 RPRMQ9NS64 109 aa16.16■□□□□ 0.18
SNRPA1-205ENST00000558036 MFSD2BA6NFX1 497 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 BLOC1S1P78537 153 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 ZNF709Q8N972 641 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 SLC25A33Q9BSK2 321 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 LSM4Q9Y4Z0 139 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 TLN2Q9Y4G6 2542 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 IGKV1OR2-108A0A075B7D4 117 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 TRIM77I1YAP6 450 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 DEFA4P12838 97 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 SLC16A13Q7RTY0 426 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 ZNF114Q8NC26 417 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 ACY3Q96HD9 319 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 MED9Q9NWA0 146 aa16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 MRPL36Q9P0J6 103 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 F11RQ9Y624 299 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-205ENST00000558036 RAB2AP61019 212 aa16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 SERF2P84101 59 aa16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 ASPHD1Q5U4P2 390 aa16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 TEPPQ6URK8 271 aa16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 CENPVQ7Z7K6 275 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 OR1P1Q8NH06 330 aa16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 RNASEH2CQ8TDP1 164 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 RBM14Q96PK6 669 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 FOXC2Q99958 501 aa16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 TIMM9Q9Y5J7 89 aa16.14■□□□□ 0.17
SNRPA1-205ENST00000558036 HLA-DRB1P01911 266 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 DEFB112Q30KQ8 113 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 FFAR4Q5NUL3 377 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 C5orf56Q8N8D9 126 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 LFNGQ8NES3 379 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 GGTLC1Q9BX51 225 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 WNT10AQ9GZT5 417 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 NOTCH2Q04721 2471 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 LINC01548A6NM66 108 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 EGR2P11161 476 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 AANATQ16613 207 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 GCSAMLQ5JQS6 135 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 SSX7Q7RTT5 188 aa16.13■□□□□ 0.17
SNRPA1-205ENST00000558036 CTRB1P17538 263 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 ZNF726P1Q15940 193 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 MIC13Q5XKP0 118 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 CTRB2Q6GPI1 263 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 HSD17B13Q7Z5P4 300 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 NANPQ8TBE9 248 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 C17orf112F2Z3M2 114 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 AMY1AP04745 511 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 TMEM41BQ5BJD5 291 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 RPP25LQ8N5L8 163 aaKnown RBP16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 MARC2Q969Z3 335 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 MOB4Q9Y3A3 225 aa16.12■□□□□ 0.17
SNRPA1-205ENST00000558036 MPDU1O75352 247 aa16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 TSPAN15O95858 294 aa16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 GPX4P36969 197 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 SRSF3P84103 164 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 PVRIGQ6DKI7 326 aa16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 TMEM144Q7Z5S9 345 aa16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 SFT2D1Q8WV19 159 aa16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 CACNG8Q8WXS5 425 aa16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 SLC35E1Q96K37 410 aa16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 SRSF8Q9BRL6 282 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-205ENST00000558036 FNDC10F2Z333 226 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 FSHBP01225 129 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 H2AFB1P0C5Y9 115 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 CCL20P78556 96 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 LYPD6BQ8NI32 183 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 NPIPB3Q92617 1050 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 PXMP4Q9Y6I8 212 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 I3L521 148 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 ATP6V0E1O15342 81 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 MT-CO2P00403 227 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 IGHV4-59P01825 116 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 GATA2P23769 480 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 IL17RELQ6ZVW7 336 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 OR5T1Q8NG75 326 aa16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 RCC1LQ96I51 464 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-205ENST00000558036 HMGB3O15347 200 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 RND2P52198 227 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 TMEM231Q9H6L2 316 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 TNFRSF19Q9NS68 423 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 ANKRD34BA5PLL1 514 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 A6NDX4 124 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 YIF1AO95070 293 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 S100A1P23297 94 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 OR10J1P30954 320 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 ECSCRQ19T08 205 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 SPSB3Q6PJ21 355 aa16.09■□□□□ 0.17
SNRPA1-205ENST00000558036 LCN15Q6UWW0 184 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms