RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 CEPT1Q9Y6K0 416 aa12.54□□□□□ -0.4
NEDD4-212ENST00000557845 TEX13DA0A0J9YY54 714 aaPredicted RBP12.53□□□□□ -0.4
NEDD4-212ENST00000557845 ANKRD20A5PA0PJZ0 165 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 INS-IGF2F8WCM5 200 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 K7EMT4 169 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 CDS2O95674 445 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 MT-CO2P00403 227 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 IFNA17P01571 189 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 OR5AC1P0C628 307 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 FCGR2BP31994 310 aaPredicted RBP12.53□□□□□ -0.4
NEDD4-212ENST00000557845 RBPMS2Q6ZRY4 209 aaKnown RBP12.53□□□□□ -0.4
NEDD4-212ENST00000557845 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 GLYATL2Q8WU03 294 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 PINX1Q96BK5 328 aaKnown RBP12.53□□□□□ -0.4
NEDD4-212ENST00000557845 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
NEDD4-212ENST00000557845 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 PRRT1Q99946 306 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 PDCD10Q9BUL8 212 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 TMEM222Q9H0R3 208 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 WFDC10AQ9H1F0 79 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 SRD5A3Q9H8P0 318 aa12.53□□□□□ -0.4
NEDD4-212ENST00000557845 DAZ1Q9NQZ3 744 aaKnown RBP12.53□□□□□ -0.4
NEDD4-212ENST00000557845 A0A0G2JRQ6 117 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 RBMY1BA6NDE4 496 aaKnown RBP12.52□□□□□ -0.41
NEDD4-212ENST00000557845 RBMY1EA6NEQ0 496 aaKnown RBP12.52□□□□□ -0.41
NEDD4-212ENST00000557845 NUPL2O15504 423 aaKnown RBP12.52□□□□□ -0.41
NEDD4-212ENST00000557845 RBMY1DP0C7P1 496 aaKnown RBP12.52□□□□□ -0.41
NEDD4-212ENST00000557845 SNCAP37840 140 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 ETV6P41212 452 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 ANKRD55Q3KP44 614 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 Q6ZRM9 215 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 SLC35G3Q8N808 338 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 OR51S1Q8NGJ8 323 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 OR52B4Q8NGK2 314 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 MUC7Q8TAX7 377 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 C20orf24Q9BUV8 137 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 NAA60Q9H7X0 242 aa12.52□□□□□ -0.41
NEDD4-212ENST00000557845 IGHV3OR16-8A0A075B7F1 116 aa12.51□□□□□ -0.41
NEDD4-212ENST00000557845 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
NEDD4-212ENST00000557845 IGHV3-48P01763 117 aa12.51□□□□□ -0.41
NEDD4-212ENST00000557845 DHODHQ02127 395 aa12.51□□□□□ -0.41
NEDD4-212ENST00000557845 RELQ04864 619 aaPredicted RBP12.51□□□□□ -0.41
NEDD4-212ENST00000557845 RNASE11Q8TAA1 199 aaKnown RBP12.51□□□□□ -0.41
NEDD4-212ENST00000557845 LHFPL5Q8TAF8 219 aa12.51□□□□□ -0.41
NEDD4-212ENST00000557845 ZNF414Q96IQ9 312 aa12.51□□□□□ -0.41
NEDD4-212ENST00000557845 TENM3Q9P273 2699 aa12.5□□□□□ -0.41
NEDD4-212ENST00000557845 CRYM-AS1A6NIL9 109 aa12.5□□□□□ -0.41
NEDD4-212ENST00000557845 ZNF207O43670 478 aaKnown RBP12.5□□□□□ -0.41
NEDD4-212ENST00000557845 SUB1P53999 127 aaKnown RBP eCLIP12.5□□□□□ -0.41
NEDD4-212ENST00000557845 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
NEDD4-212ENST00000557845 FAM219AQ8IW50 185 aa12.5□□□□□ -0.41
NEDD4-212ENST00000557845 SELENOHQ8IZQ5 122 aaKnown RBP12.5□□□□□ -0.41
NEDD4-212ENST00000557845 RBPMSQ93062 196 aaKnown RBP12.5□□□□□ -0.41
NEDD4-212ENST00000557845 HIPK2Q9H2X6 1198 aa12.5□□□□□ -0.41
NEDD4-212ENST00000557845 EDA2RQ9HAV5 297 aa12.5□□□□□ -0.41
NEDD4-212ENST00000557845 SCP2D1Q9UJQ7 156 aa12.5□□□□□ -0.41
NEDD4-212ENST00000557845 TSPAN4O14817 238 aa12.49□□□□□ -0.41
NEDD4-212ENST00000557845 GNG7O60262 68 aa12.49□□□□□ -0.41
NEDD4-212ENST00000557845 RNASE2P10153 161 aaKnown RBP12.49□□□□□ -0.41
NEDD4-212ENST00000557845 CASC10Q5T4H9 136 aa12.49□□□□□ -0.41
NEDD4-212ENST00000557845 LAMTOR1Q6IAA8 161 aa12.49□□□□□ -0.41
NEDD4-212ENST00000557845 DUSP18Q8NEJ0 188 aa12.49□□□□□ -0.41
NEDD4-212ENST00000557845 OR10C1Q96KK4 312 aa12.49□□□□□ -0.41
NEDD4-212ENST00000557845 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
NEDD4-212ENST00000557845 ENY2Q9NPA8 101 aa12.49□□□□□ -0.41
NEDD4-212ENST00000557845 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
NEDD4-212ENST00000557845 KCNIP3Q9Y2W7 256 aa12.49□□□□□ -0.41
NEDD4-212ENST00000557845 CCDC160A6NGH7 325 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 YIF1AO95070 293 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 HOXA1P49639 335 aaPredicted RBP12.48□□□□□ -0.41
NEDD4-212ENST00000557845 SPCS3P61009 180 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 AARDQ4LEZ3 155 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 TMEM268Q5VZI3 342 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 OR52E5Q8NH55 327 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 MCUBQ9NWR8 336 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 SMPXQ9UHP9 88 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 TMEM56-RWDD3S4R434 201 aa12.48□□□□□ -0.41
NEDD4-212ENST00000557845 CORTO00230 105 aa12.47□□□□□ -0.41
NEDD4-212ENST00000557845 TMEM50AO95807 157 aa12.47□□□□□ -0.41
NEDD4-212ENST00000557845 LYL1P12980 280 aa12.47□□□□□ -0.41
NEDD4-212ENST00000557845 NPBWR1P48145 328 aa12.47□□□□□ -0.41
NEDD4-212ENST00000557845 TMEM230Q96A57 120 aa12.47□□□□□ -0.41
NEDD4-212ENST00000557845 RETNQ9HD89 108 aa12.47□□□□□ -0.41
NEDD4-212ENST00000557845 DNAH7Q8WXX0 4024 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 TRAV14DV4A0A0A6YYC5 116 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 IGHV7-4-1A0A0J9YVY3 117 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 CHEK1O14757 476 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 TMEM187Q14656 261 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 MLANAQ16655 118 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 BSXQ3C1V8 233 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 PYDC2Q56P42 97 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 TMEM116Q8NCL8 245 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 GALNT14Q96FL9 552 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 RHPN1-AS1Q9BWJ2 59 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 CACNG5Q9UF02 275 aa12.46□□□□□ -0.41
NEDD4-212ENST00000557845 RYR3Q15413 4870 aa12.46□□□□□ -0.42
NEDD4-212ENST00000557845 LOC102724200A0A096LPH7 203 aaPredicted RBP12.45□□□□□ -0.42
NEDD4-212ENST00000557845 AKR1C4P17516 323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms