RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 LPCAT3Q6P1A2 487 aa11.67□□□□□ -0.54
SCFD1-224ENST00000557713 TBC1D26Q86UD7 250 aa11.67□□□□□ -0.54
SCFD1-224ENST00000557713 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
SCFD1-224ENST00000557713 OR4A16Q8NH70 328 aa11.67□□□□□ -0.54
SCFD1-224ENST00000557713 MFFQ9GZY8 342 aa11.67□□□□□ -0.54
SCFD1-224ENST00000557713 GNG7O60262 68 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 APOHP02749 345 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-224ENST00000557713 IFNA4P05014 189 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 CD5P06127 495 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 HSPE1P61604 102 aaKnown RBP11.66□□□□□ -0.54
SCFD1-224ENST00000557713 PAFAH1B2P68402 229 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 RBMS2Q15434 407 aaKnown RBP11.66□□□□□ -0.54
SCFD1-224ENST00000557713 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 TCF24Q7RTU0 167 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 H2BFWTQ7Z2G1 175 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 GPX8Q8TED1 209 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 VSIRQ9H7M9 311 aa11.66□□□□□ -0.54
SCFD1-224ENST00000557713 UCP3P55916 312 aa11.65□□□□□ -0.54
SCFD1-224ENST00000557713 ST8SIA2Q92186 375 aa11.65□□□□□ -0.54
SCFD1-224ENST00000557713 PINX1Q96BK5 328 aaKnown RBP11.65□□□□□ -0.54
SCFD1-224ENST00000557713 GINS3Q9BRX5 216 aa11.65□□□□□ -0.54
SCFD1-224ENST00000557713 FBXL17Q9UF56 701 aa11.65□□□□□ -0.54
SCFD1-224ENST00000557713 HECTD4Q9Y4D8 3996 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 DFFBO76075 338 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 CA1P00915 261 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-224ENST00000557713 S100GP29377 79 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 TSPAN5P62079 268 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 ERHP84090 104 aaKnown RBP11.64□□□□□ -0.55
SCFD1-224ENST00000557713 PRR20EP86478 221 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 PRR20CP86479 221 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 PRR20DP86480 221 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 PRR20BP86481 221 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 PRR20AP86496 221 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 TMEM187Q14656 261 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 MRGPRFQ96AM1 343 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 MS4A6AQ9H2W1 248 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 ZFAND3Q9H8U3 227 aa11.64□□□□□ -0.55
SCFD1-224ENST00000557713 TRAV2A0A0B4J234 112 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 DEFB4AO15263 64 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 ST8SIA3O43173 380 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 TMEM50AO95807 157 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 EIF4EP06730 217 aaKnown RBP11.63□□□□□ -0.55
SCFD1-224ENST00000557713 NPBWR1P48145 328 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 TCTAP57738 103 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 DEFB131AP59861 70 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 KCTD21Q4G0X4 260 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 PVRIGQ6DKI7 326 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 FAM24BQ8N5W8 94 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 DUSP18Q8NEJ0 188 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 C2CD4CQ8TF44 421 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 YIPF6Q96EC8 236 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 DNAH6Q9C0G6 4158 aa11.63□□□□□ -0.55
SCFD1-224ENST00000557713 A0A1B0GU03 582 aa11.62□□□□□ -0.55
SCFD1-224ENST00000557713 INS-IGF2F8WCM5 200 aa11.62□□□□□ -0.55
SCFD1-224ENST00000557713 DNASE2O00115 360 aaPredicted RBP11.62□□□□□ -0.55
SCFD1-224ENST00000557713 LSM3P62310 102 aaKnown RBP11.62□□□□□ -0.55
SCFD1-224ENST00000557713 IZUMO4Q1ZYL8 232 aa11.62□□□□□ -0.55
SCFD1-224ENST00000557713 LEMD1Q68G75 181 aa11.62□□□□□ -0.55
SCFD1-224ENST00000557713 ZNF600Q6ZNG1 722 aa11.62□□□□□ -0.55
SCFD1-224ENST00000557713 SCPEP1Q9HB40 452 aa11.62□□□□□ -0.55
SCFD1-224ENST00000557713 PUS1Q9Y606 427 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCFD1-224ENST00000557713 IGHV3-66A0A0C4DH42 116 aa11.61□□□□□ -0.55
SCFD1-224ENST00000557713 IGKV1-5P01602 117 aa11.61□□□□□ -0.55
SCFD1-224ENST00000557713 GIG44P09565 113 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-224ENST00000557713 SPINK9Q5DT21 86 aa11.61□□□□□ -0.55
SCFD1-224ENST00000557713 APLNQ9ULZ1 77 aa11.61□□□□□ -0.55
SCFD1-224ENST00000557713 A0A0B4J293 547 aa11.6□□□□□ -0.55
SCFD1-224ENST00000557713 P0C879 139 aa11.6□□□□□ -0.55
SCFD1-224ENST00000557713 RCVRNP35243 200 aa11.6□□□□□ -0.55
SCFD1-224ENST00000557713 SNCAP37840 140 aa11.6□□□□□ -0.55
SCFD1-224ENST00000557713 Q8NAQ8 132 aa11.6□□□□□ -0.55
SCFD1-224ENST00000557713 HRH4Q9H3N8 390 aa11.6□□□□□ -0.55
SCFD1-224ENST00000557713 COMMD3Q9UBI1 195 aa11.6□□□□□ -0.55
SCFD1-224ENST00000557713 SMIM31A0A1B0GVY4 71 aa11.59□□□□□ -0.55
SCFD1-224ENST00000557713 APOA1P02647 267 aa11.59□□□□□ -0.55
SCFD1-224ENST00000557713 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
SCFD1-224ENST00000557713 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
SCFD1-224ENST00000557713 NPPCP23582 126 aa11.59□□□□□ -0.55
SCFD1-224ENST00000557713 RND3P61587 244 aa11.59□□□□□ -0.55
SCFD1-224ENST00000557713 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
SCFD1-224ENST00000557713 RBMY1FQ15415 496 aaKnown RBP11.59□□□□□ -0.55
SCFD1-224ENST00000557713 TRPT1Q86TN4 253 aaKnown RBP11.59□□□□□ -0.55
SCFD1-224ENST00000557713 SNX29P2Q8IUI4 249 aa11.59□□□□□ -0.55
SCFD1-224ENST00000557713 STHQ8IWL8 128 aa11.59□□□□□ -0.55
SCFD1-224ENST00000557713 TMEM231Q9H6L2 316 aa11.59□□□□□ -0.55
SCFD1-224ENST00000557713 MRPL36Q9P0J6 103 aaKnown RBP11.59□□□□□ -0.55
SCFD1-224ENST00000557713 IGLL5B9A064 214 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 C11orf94C9JXX5 98 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 K7EQG2 157 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 M0QYG6 137 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
SCFD1-224ENST00000557713 ELK1P19419 428 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 CRYBB3P26998 211 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 MLANAQ16655 118 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 ZNF486Q96H40 463 aaPredicted RBP11.58□□□□□ -0.56
SCFD1-224ENST00000557713 TP53RKQ96S44 253 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 RABAC1Q9UI14 185 aa11.58□□□□□ -0.56
SCFD1-224ENST00000557713 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 A0A1W2PS18 150 aa11.57□□□□□ -0.56
SCFD1-224ENST00000557713 CORTO00230 105 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms