RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 FAM223BA6NKX1 122 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 DHFRP00374 187 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 RHOGP84095 191 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 SMCO1Q147U7 214 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 SPINK9Q5DT21 86 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 FAM223AQ8IWN6 122 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 MITD1Q8WV92 249 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 FANCD2OSQ96PS1 177 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 SEC22CQ9BRL7 303 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.71□□□□□ -0.37
NEK9-211ENST00000557673 TMED3Q9Y3Q3 217 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 DMRT1Q9Y5R6 373 aa12.71□□□□□ -0.37
NEK9-211ENST00000557673 LYSTQ99698 3801 aa12.7□□□□□ -0.38
NEK9-211ENST00000557673 IGLV11-55A0A075B6I3 123 aa12.7□□□□□ -0.38
NEK9-211ENST00000557673 INS-IGF2F8WCM5 200 aa12.7□□□□□ -0.38
NEK9-211ENST00000557673 IFNA17P01571 189 aa12.7□□□□□ -0.38
NEK9-211ENST00000557673 HSPB1P04792 205 aaKnown RBP12.7□□□□□ -0.38
NEK9-211ENST00000557673 ZNF114Q8NC26 417 aa12.7□□□□□ -0.38
NEK9-211ENST00000557673 NECAP1Q8NC96 275 aa12.7□□□□□ -0.38
NEK9-211ENST00000557673 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
NEK9-211ENST00000557673 F11RQ9Y624 299 aaKnown RBP12.7□□□□□ -0.38
NEK9-211ENST00000557673 A0A0G2JLM5 398 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 A0A1B0GU03 582 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 C13orf42A0A1B0GVH6 325 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 A8MZ25 164 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 ADAP1O75689 374 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 OR2J3O76001 311 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 PTTG1O95997 202 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 HOXB5P09067 269 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 SLC25A6P12236 298 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 DEFA4P12838 97 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 HOXA1P49639 335 aaPredicted RBP12.69□□□□□ -0.38
NEK9-211ENST00000557673 SPCS3P61009 180 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 GGNBP1Q5YKI7 109 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 PLET1Q6UQ28 207 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 OR2C3Q8N628 320 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 ZNF431Q8TF32 576 aaPredicted RBP12.69□□□□□ -0.38
NEK9-211ENST00000557673 USMG5Q96IX5 58 aa12.69□□□□□ -0.38
NEK9-211ENST00000557673 ANKRD34BA5PLL1 514 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 PITX3O75364 302 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 NXPH3O95157 252 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 IL5P05113 134 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 HIST1H1BP16401 226 aaKnown RBP12.68□□□□□ -0.38
NEK9-211ENST00000557673 MFAP2P55001 183 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 TNFRSF9Q07011 255 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 EXOSC2Q13868 293 aaKnown RBP12.68□□□□□ -0.38
NEK9-211ENST00000557673 MARVELD1Q9BSK0 173 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 HSPB7Q9UBY9 170 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 CACFD1Q9UGQ2 172 aa12.68□□□□□ -0.38
NEK9-211ENST00000557673 C15orf32Q32M92 178 aa12.67□□□□□ -0.38
NEK9-211ENST00000557673 OR1P1Q8NH06 330 aa12.67□□□□□ -0.38
NEK9-211ENST00000557673 OR1S1Q8NH92 325 aa12.67□□□□□ -0.38
NEK9-211ENST00000557673 SPATA25Q9BR10 227 aa12.67□□□□□ -0.38
NEK9-211ENST00000557673 EDA2RQ9HAV5 297 aa12.67□□□□□ -0.38
NEK9-211ENST00000557673 FBXL7Q9UJT9 491 aa12.67□□□□□ -0.38
NEK9-211ENST00000557673 MPTX1A8MV57 137 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 INMT-MINDY4F8WBC2 141 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 CYB5BO43169 146 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 PRAF2O60831 178 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 NDUFB8O95169 186 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 ERHP84090 104 aaKnown RBP12.66□□□□□ -0.38
NEK9-211ENST00000557673 ZNF343Q6P1L6 599 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 OR1L6Q8NGR2 347 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 RANGRFQ9HD47 186 aaPredicted RBP12.66□□□□□ -0.38
NEK9-211ENST00000557673 ENY2Q9NPA8 101 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 C19orf73Q9NVV2 129 aa12.66□□□□□ -0.38
NEK9-211ENST00000557673 CSMD3Q7Z407 3707 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 MFSD2BA6NFX1 497 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 CEBPZOSA8MTT3 80 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 FAM90A26D6RGX4 464 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 IFNA21P01568 189 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 IGLV1-51P01701 117 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 TRBV12-3P01733 135 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 RNASE2P10153 161 aaKnown RBP12.65□□□□□ -0.38
NEK9-211ENST00000557673 ZP3P21754 424 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 ATP5G2Q06055 141 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 BSXQ3C1V8 233 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 Q8N1Y9 231 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 C12orf45Q8N5I9 185 aaPredicted RBP12.65□□□□□ -0.38
NEK9-211ENST00000557673 CCDC140Q96MF4 163 aa12.65□□□□□ -0.38
NEK9-211ENST00000557673 DNAH1Q9P2D7 4330 aa12.64□□□□□ -0.39
NEK9-211ENST00000557673 CCSO14618 274 aa12.64□□□□□ -0.39
NEK9-211ENST00000557673 HAPLN4Q86UW8 402 aa12.64□□□□□ -0.39
NEK9-211ENST00000557673 RBKSQ9H477 322 aa12.64□□□□□ -0.39
NEK9-211ENST00000557673 GPN1Q9HCN4 374 aaPredicted RBP12.64□□□□□ -0.39
NEK9-211ENST00000557673 THYN1Q9P016 225 aa12.64□□□□□ -0.39
NEK9-211ENST00000557673 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.63□□□□□ -0.39
NEK9-211ENST00000557673 SNRPGP15A8MWD9 76 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 K7EIM0 57 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 JTBO76095 146 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 SNCAP37840 140 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 PVRIGQ6DKI7 326 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 SLC25A24Q6NUK1 477 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 SLC24A4Q8NFF2 622 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 OR4D5Q8NGN0 318 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 IL17DQ8TAD2 202 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 DTD1Q8TEA8 209 aa12.63□□□□□ -0.39
NEK9-211ENST00000557673 EEF1AKMT3Q96AZ1 226 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms