RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 APRG1Q8IVJ8 170 aa11.73□□□□□ -0.53
TUBB3-213ENST00000557262 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
TUBB3-213ENST00000557262 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
TUBB3-213ENST00000557262 M0QYG6 137 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 HPGDSO60760 199 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 IGHV3-48P01763 117 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 CD5P06127 495 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 TFPI2P48307 235 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 RORCP51449 518 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 RND3P61587 244 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 FAM90A2PQ658T7 463 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 ZNF486Q96H40 463 aaPredicted RBP11.72□□□□□ -0.53
TUBB3-213ENST00000557262 CSTL1Q9H114 145 aa11.72□□□□□ -0.53
TUBB3-213ENST00000557262 KLK5Q9Y337 293 aaPredicted RBP11.72□□□□□ -0.53
TUBB3-213ENST00000557262 IGKV3-7A0A075B6H7 116 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 PGAM2P15259 253 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 NPBWR1P48145 328 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 PAFAH1B2P68402 229 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 MZT2AQ6P582 158 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 DUSP18Q8NEJ0 188 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 GINS3Q9BRX5 216 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 KLK11Q9UBX7 282 aa11.71□□□□□ -0.53
TUBB3-213ENST00000557262 IGHV3OR16-13A0A075B7E8 117 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 IGHV3-74A0A0B4J1X5 117 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 MPTX1A8MV57 137 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 FAM25AB3EWG3 89 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 FAM25CB3EWG5 89 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 FAM25GB3EWG6 89 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 INS-IGF2F8WCM5 200 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 SNCAP37840 140 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 ZNF124Q15973 351 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 RNASE10Q5GAN6 216 aaKnown RBP11.7□□□□□ -0.54
TUBB3-213ENST00000557262 TOMM20LQ6UXN7 152 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 GBGT1Q8N5D6 347 aa11.7□□□□□ -0.54
TUBB3-213ENST00000557262 A0A0B4J293 547 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 ATG12O94817 140 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 TMEM50AO95807 157 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 IGKV1-5P01602 117 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 PI3P19957 117 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 SUB1P53999 127 aaKnown RBP eCLIP11.69□□□□□ -0.54
TUBB3-213ENST00000557262 PIGPP57054 158 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 LHFPL1Q86WI0 220 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 ARRDC1Q8N5I2 433 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 RARRES2Q99969 163 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 VSIRQ9H7M9 311 aa11.69□□□□□ -0.54
TUBB3-213ENST00000557262 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 IFNA17P01571 189 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 CD3DP04234 171 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 P0C879 139 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 AKR1C2P52895 323 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 RNASE12Q5GAN4 147 aaKnown RBP11.68□□□□□ -0.54
TUBB3-213ENST00000557262 PVRIGQ6DKI7 326 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 ZNF600Q6ZNG1 722 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 LILRB2Q8N423 598 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 SLC35G3Q8N808 338 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 OR52I2Q8NH67 350 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 ZFAND1Q8TCF1 268 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 ST8SIA2Q92186 375 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 MTFP1Q9UDX5 166 aa11.68□□□□□ -0.54
TUBB3-213ENST00000557262 DNASE2O00115 360 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-213ENST00000557262 CORTO00230 105 aa11.67□□□□□ -0.54
TUBB3-213ENST00000557262 APOHP02749 345 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-213ENST00000557262 ZNF182P17025 639 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-213ENST00000557262 TBPP20226 339 aa11.67□□□□□ -0.54
TUBB3-213ENST00000557262 ETV6P41212 452 aa11.67□□□□□ -0.54
TUBB3-213ENST00000557262 TERB2Q8NHR7 220 aa11.67□□□□□ -0.54
TUBB3-213ENST00000557262 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
TUBB3-213ENST00000557262 AP3S1Q92572 193 aa11.67□□□□□ -0.54
TUBB3-213ENST00000557262 PDCD10Q9BUL8 212 aa11.67□□□□□ -0.54
TUBB3-213ENST00000557262 COPZ2Q9P299 210 aa11.67□□□□□ -0.54
TUBB3-213ENST00000557262 PUS1Q9Y606 427 aaKnown RBP eCLIP11.67□□□□□ -0.54
TUBB3-213ENST00000557262 TRAV2A0A0B4J234 112 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 DFFBO76075 338 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
TUBB3-213ENST00000557262 NPPCP23582 126 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 RPL11P62913 178 aaKnown RBP11.66□□□□□ -0.54
TUBB3-213ENST00000557262 SP6Q3SY56 376 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 C15orf40Q8WUR7 153 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 RRNAD1Q96FB5 475 aaKnown RBP11.66□□□□□ -0.54
TUBB3-213ENST00000557262 ABHD1Q96SE0 405 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 MS4A6AQ9H2W1 248 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 ENY2Q9NPA8 101 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 EXTL2Q9UBQ6 330 aa11.66□□□□□ -0.54
TUBB3-213ENST00000557262 IGHV3-66A0A0C4DH42 116 aa11.65□□□□□ -0.54
TUBB3-213ENST00000557262 A0A1B0GU03 582 aa11.65□□□□□ -0.54
TUBB3-213ENST00000557262 DEFB131AP59861 70 aa11.65□□□□□ -0.54
TUBB3-213ENST00000557262 TRIM16LQ309B1 348 aa11.65□□□□□ -0.54
TUBB3-213ENST00000557262 CCDC71LQ8N9Z2 235 aa11.65□□□□□ -0.54
TUBB3-213ENST00000557262 TMEM229BQ8NBD8 167 aa11.65□□□□□ -0.54
TUBB3-213ENST00000557262 OR11H2Q8NH07 326 aa11.65□□□□□ -0.54
TUBB3-213ENST00000557262 TMEM231Q9H6L2 316 aa11.65□□□□□ -0.54
TUBB3-213ENST00000557262 KMT2AQ03164 3969 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 A0A1W2PS18 150 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms