RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 FAM222AQ5U5X8 452 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 UBE2UQ5VVX9 321 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 MEDAGQ5VYS4 303 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 RPL22L1Q6P5R6 122 aaKnown RBP3.25□□□□□ -1.89
SCFD1-223ENST00000557076 TCF24Q7RTU0 167 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 NOXA1Q86UR1 476 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 AQP12AQ8IXF9 295 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 PUSL1Q8N0Z8 303 aaKnown RBP3.25□□□□□ -1.89
SCFD1-223ENST00000557076 JAGN1Q8N5M9 183 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 FAM24BQ8N5W8 94 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 SETD6Q8TBK2 473 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 C5orf30Q96GV9 206 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 GRAMD2BQ96HH9 432 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 RAB40CQ96S21 281 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 DCUN1D5Q9BTE7 237 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 OR2D2Q9H210 308 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 VSIRQ9H7M9 311 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 PRELID3BQ9Y3B1 194 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 LINC00588Q9Y4M8 146 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 TRAV8-7A0A075B6U6 113 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 TRBV6-7A0A0A0MS04 114 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 TRBV5-5A0A0J9YX44 114 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 IGLC7A0M8Q6 106 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 CBY3A6NI87 242 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 KNCNA6PVL3 124 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 OGG1O15527 345 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 FCGR3BO75015 233 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 DCTN3O75935 186 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 UBBP0CG47 229 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 TNFSF8P32971 234 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 ALDH3B2P48448 385 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 HOXA1P49639 335 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-223ENST00000557076 GTF2A1P52655 376 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-223ENST00000557076 EMP1P54849 157 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 OR2B8PP59922 312 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 RPL8P62917 257 aaKnown RBP3.24□□□□□ -1.89
SCFD1-223ENST00000557076 DLK1P80370 383 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 ACTL10Q5JWF8 245 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 TBC1D26Q86UD7 250 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 VKORC1L1Q8N0U8 176 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 OR6M1Q8NGM8 313 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 OR4A4PQ8NGN8 299 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 OR10J5Q8NHC4 309 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 ORAI1Q96D31 301 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 LGALS12Q96DT0 336 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 TM2D1Q9BX74 207 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 MAGT1Q9H0U3 335 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 C21orf62Q9NYP8 219 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 RFNGQ9Y644 331 aa3.24□□□□□ -1.89
SCFD1-223ENST00000557076 IGHV3-49A0A0A0MS15 119 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 A0A0B4J293 547 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 G3V2T6 193 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 K7EQG2 157 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 NUPL2O15504 423 aaKnown RBP3.23□□□□□ -1.89
SCFD1-223ENST00000557076 PAGE4O60829 102 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 FKBP6O75344 327 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 SLC22A5O76082 557 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 YIF1AO95070 293 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 HRASP01112 189 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 SERPINE2P07093 398 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 P0C879 139 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 CD37P11049 281 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 FCGR1AP12314 374 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 HLA-GP17693 338 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 DCKP27707 260 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 FGF9P31371 208 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-223ENST00000557076 BRWD1-AS2P59051 145 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 RPS11P62280 158 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCFD1-223ENST00000557076 Q499Y3 187 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 OR2G6Q5TZ20 316 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 TTC23Q5W5X9 447 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 SLC25A24Q6NUK1 477 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 Q6ZRN7 208 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-223ENST00000557076 SSX7Q7RTT5 188 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 HSD17B13Q7Z5P4 300 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-223ENST00000557076 CBR4Q8N4T8 237 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 FAM89BQ8N5H3 189 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 GDPD1Q8N9F7 314 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 TXN2Q99757 166 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 SLC29A1Q99808 456 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 HDHD3Q9BSH5 251 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-223ENST00000557076 TMEM70Q9BUB7 260 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 C12orf4Q9NQ89 552 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 BABAM2Q9NXR7 383 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 XCL2Q9UBD3 114 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 RABAC1Q9UI14 185 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 AK3Q9UIJ7 227 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 RBM7Q9Y580 266 aaKnown RBP3.23□□□□□ -1.89
SCFD1-223ENST00000557076 FAT3Q8TDW7 4589 aa3.23□□□□□ -1.89
SCFD1-223ENST00000557076 IGHV3OR16-13A0A075B7E8 117 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 IGHV3-74A0A0B4J1X5 117 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 A0A1W2PS18 150 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 H3BMM0 161 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 K7EIM0 57 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 BET1O15155 118 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 FABP7O15540 132 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 ST8SIA3O43173 380 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 APOHP02749 345 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-223ENST00000557076 CDK1P06493 297 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 EIF4EP06730 217 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms