RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 TRBV9A0A0B4J1U6 114 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 TRAV24A0A0B4J272 114 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 A0A1W2PPI3 338 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 LRRC30A6NM36 301 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 C15orf62A8K5M9 175 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ZNF705FA8MVS1 300 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 G3V3Y1 287 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 SLC33A1O00400 549 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 TNFSF13O75888 250 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 MT-CO2P00403 227 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 CGAP01215 116 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 CD55P08174 381 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 SNRPCP09234 159 aaKnown RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 OR4A8P0C604 315 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 P0C879 139 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 PATE4P0C8F1 98 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ZNF705DP0CH99 300 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ZNF705BP0CI00 300 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ESDP10768 282 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 SFTPCP11686 197 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 KITLGP21583 273 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 MDKP21741 143 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 IL3RAP26951 378 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 DUSP3P51452 185 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 YPEL3P61236 119 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 SELENOTP62341 195 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 GNB2P62879 340 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 PLGLB1Q02325 96 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 FAM78BQ5VT40 261 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 SLC35E4Q6ICL7 350 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 OR8G2PQ6IF36 304 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ZNF497Q6ZNH5 498 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 TEX43Q6ZNM6 134 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 TIPARPQ7Z3E1 657 aaKnown RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 TMEM144Q7Z5S9 345 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 C5orf24Q7Z6I8 188 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 LINC01551Q86U37 167 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 C17orf78Q8N4C9 275 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 DRAM1Q8N682 238 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ZNF645Q8N7E2 425 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 OR4B1Q8NGF8 309 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 OR2Y1Q8NGV0 311 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 FGFBP3Q8TAT2 258 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 CMTM2Q8TAZ6 248 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 DTD1Q8TEA8 209 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 IL1F10Q8WWZ1 152 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 RDH5Q92781 318 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 MIEN1Q9BRT3 115 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 RTL8AQ9BWD3 113 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 SNHG12Q9BXW3 62 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 NPCDR1Q9BY65 106 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 TMEM106BQ9NUM4 274 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 TRAPPC2LQ9UL33 140 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 BOKQ9UMX3 212 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 PPP1R3CQ9UQK1 317 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 WIPI2Q9Y4P8 454 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ARL2-SNX15V9GYD0 113 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 PHF3Q92576 2039 aaKnown RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ZFYVE26Q68DK2 2539 aa3.81□□□□□ -1.8
ATXN3-246ENST00000557030 ANKRD17O75179 2603 aaKnown RBP3.8□□□□□ -1.8
ATXN3-246ENST00000557030 EML6Q6ZMW3 1958 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 A0A1W2PNU3 283 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-246ENST00000557030 A0A1W2PPV4 95 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 TMEM30CPA0ZSE6 113 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 C5orf49A4QMS7 147 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 SH2D1BO14796 132 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 DLEU1O43261 78 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 SYNGR1O43759 233 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 MMP23AO75900 390 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 HPRT1P00492 218 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 IGKV1D-33P01593 117 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 IGKV1-33P01594 117 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 MT-ND6P03923 174 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 SP9P0CG40 484 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 SELEP16581 610 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 ZNF25P17030 456 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-246ENST00000557030 ACP1P24666 158 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 GDF1P27539 372 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 OR3A1P47881 315 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 RBPJQ06330 500 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 Q0VG73 95 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 GABRA6Q16445 453 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 Q6P435 159 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 ZNF705AQ6ZN79 300 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-246ENST00000557030 TRPT1Q86TN4 253 aaKnown RBP3.8□□□□□ -1.8
ATXN3-246ENST00000557030 YRDCQ86U90 279 aaKnown RBP3.8□□□□□ -1.8
ATXN3-246ENST00000557030 FGFRL1Q8N441 504 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 OR1K1Q8NGR3 316 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 CT55Q8WUE5 264 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 SFRP2Q96HF1 295 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 VAMP8Q9BV40 100 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 FGF23Q9GZV9 251 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-246ENST00000557030 OR51B6Q9H340 312 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 ZDHHC11Q9H8X9 412 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 OR1A1Q9P1Q5 309 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 B4GALT7Q9UBV7 327 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 WDR83OSQ9Y284 106 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 GOLT1BQ9Y3E0 138 aa3.8□□□□□ -1.8
ATXN3-246ENST00000557030 CACNA1CQ13936 2221 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms