RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 ISLRO14498 428 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 IGHG3P01860 377 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 APCSP02743 223 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 OR5G3P0C626 314 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 ZNF883P0CG24 379 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 CT45A6P0DMU7 189 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 CT45A5P0DMU8 189 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 CT45A7P0DMV0 189 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 USF1P22415 310 aaPredicted RBP9.28□□□□□ -0.92
SRP54-213ENST00000556994 PPOXP50336 477 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 MZT1Q08AG7 82 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 LCN12Q6JVE5 192 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 MRPL52Q86TS9 123 aaKnown RBP9.28□□□□□ -0.92
SRP54-213ENST00000556994 IGF2BP2-AS1Q96M15 143 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 TXN2Q99757 166 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 SLC25A33Q9BSK2 321 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 ZNF71Q9NQZ8 489 aaPredicted RBP9.28□□□□□ -0.92
SRP54-213ENST00000556994 RP1L1Q8IWN7 2480 aaPredicted RBP9.28□□□□□ -0.92
SRP54-213ENST00000556994 DPRXA6NFQ7 191 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 C19orf67A6NJJ6 358 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 UPK2O00526 184 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 CDX4O14627 284 aaPredicted RBP9.28□□□□□ -0.92
SRP54-213ENST00000556994 HYPMO75409 117 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 PYYP10082 97 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 RPL19P84098 196 aaKnown RBP9.28□□□□□ -0.92
SRP54-213ENST00000556994 PRCDQ00LT1 54 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 GAGE1Q13065 139 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 COL5A1-AS1Q5SY13 56 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 Q6ZN92 141 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 BHLHA15Q7RTS1 189 aaPredicted RBP9.28□□□□□ -0.92
SRP54-213ENST00000556994 STPG4Q8N801 248 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 ZNF439Q8NDP4 499 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 C1orf162Q8NEQ5 155 aaPredicted RBP9.28□□□□□ -0.92
SRP54-213ENST00000556994 CCL13Q99616 98 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 ZNF355PQ9NSJ1 428 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 SLC35D1Q9NTN3 355 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 PRNDQ9UKY0 176 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 PLCE1Q9P212 2302 aa9.28□□□□□ -0.92
SRP54-213ENST00000556994 LHBP01229 141 aa9.27□□□□□ -0.92
SRP54-213ENST00000556994 HLA-DQA1P01909 254 aa9.27□□□□□ -0.92
SRP54-213ENST00000556994 C8orf88P0DMB2 117 aa9.27□□□□□ -0.92
SRP54-213ENST00000556994 GPR6P46095 362 aaPredicted RBP9.27□□□□□ -0.92
SRP54-213ENST00000556994 PRR27Q6MZM9 219 aa9.27□□□□□ -0.92
SRP54-213ENST00000556994 C11orf42Q8N5U0 333 aa9.27□□□□□ -0.92
SRP54-213ENST00000556994 SGK494Q96LW2 274 aa9.27□□□□□ -0.92
SRP54-213ENST00000556994 RBM14Q96PK6 669 aaKnown RBP9.27□□□□□ -0.92
SRP54-213ENST00000556994 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.92
SRP54-213ENST00000556994 PLSCR4Q9NRQ2 329 aa9.27□□□□□ -0.92
SRP54-213ENST00000556994 E7EUB6 86 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 SIAH2O43255 324 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 SAA1P0DJI8 122 aaPredicted RBP9.27□□□□□ -0.93
SRP54-213ENST00000556994 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 IGLC3P0DOY3 106 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 CHRNB4P30926 498 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 PRRX1P54821 245 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 TAS2R45P59539 299 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 UBE2L3P68036 154 aaKnown RBP9.27□□□□□ -0.93
SRP54-213ENST00000556994 Q6ZVH6 145 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 LHFPL4Q7Z7J7 247 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 FAM216BQ8N7L0 139 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
SRP54-213ENST00000556994 SLC25A2Q9BXI2 301 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 TUBG2Q9NRH3 451 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 PROCRQ9UNN8 238 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 SLC25A15Q9Y619 301 aa9.27□□□□□ -0.93
SRP54-213ENST00000556994 TANC2Q9HCD6 1990 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 CACNA1GO43497 2377 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 IZUMO1RA6ND01 250 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 PRR33A8MZF0 331 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 TCF21O43680 179 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 RNASE2P10153 161 aaKnown RBP9.26□□□□□ -0.93
SRP54-213ENST00000556994 MFAP2P55001 183 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 TNXAQ16473 311 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 C18orf32Q8TCD1 76 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 BORCS7Q96B45 105 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 SLC35E1Q96K37 410 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 FAM167A-AS1Q96KT0 104 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 CLEC7AQ9BXN2 247 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 DCAF16Q9NXF7 216 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 DKK4Q9UBT3 224 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 ARL2-SNX15V9GYD0 113 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 RAI1Q7Z5J4 1906 aaPredicted RBP9.26□□□□□ -0.93
SRP54-213ENST00000556994 NAV3Q8IVL0 2385 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 DMXL2Q8TDJ6 3036 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 A0A1W2PRE2 83 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 PLAUP00749 431 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 WT1P19544 449 aaPredicted RBP9.26□□□□□ -0.93
SRP54-213ENST00000556994 CFHR2P36980 270 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
SRP54-213ENST00000556994 KLF3P57682 345 aaPredicted RBP9.26□□□□□ -0.93
SRP54-213ENST00000556994 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.26□□□□□ -0.93
SRP54-213ENST00000556994 UQCR10Q9UDW1 63 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 PLXNB1O43157 2135 aa9.26□□□□□ -0.93
SRP54-213ENST00000556994 A0A1W2PN81 502 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 FNDC10F2Z333 226 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 NDUFB8O95169 186 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 REG1BP48304 166 aa9.25□□□□□ -0.93
SRP54-213ENST00000556994 CAMPP49913 170 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms