RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 TMEM190Q8WZ59 177 aa17.07■□□□□ 0.32
PABPN1-207ENST00000556821 RRNAD1Q96FB5 475 aaKnown RBP17.07■□□□□ 0.32
PABPN1-207ENST00000556821 MISP3Q96FF7 219 aa17.07■□□□□ 0.32
PABPN1-207ENST00000556821 C19orf73Q9NVV2 129 aa17.07■□□□□ 0.32
PABPN1-207ENST00000556821 MLXQ9UH92 298 aa17.07■□□□□ 0.32
PABPN1-207ENST00000556821 A8MZ25 164 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 ETV6P41212 452 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 DHODHQ02127 395 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 CASC10Q5T4H9 136 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 TMEM268Q5VZI3 342 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 FAM219AQ8IW50 185 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 UXS1Q8NBZ7 420 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 RNASE11Q8TAA1 199 aaKnown RBP17.06■□□□□ 0.32
PABPN1-207ENST00000556821 GALNT14Q96FL9 552 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 TECRQ9NZ01 308 aaKnown RBP17.06■□□□□ 0.32
PABPN1-207ENST00000556821 PRR13Q9NZ81 148 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 TMEM56-RWDD3S4R434 201 aa17.06■□□□□ 0.32
PABPN1-207ENST00000556821 MT-CO2P00403 227 aa17.05■□□□□ 0.32
PABPN1-207ENST00000556821 IFNA17P01571 189 aa17.05■□□□□ 0.32
PABPN1-207ENST00000556821 C8orf88P0DMB2 117 aa17.05■□□□□ 0.32
PABPN1-207ENST00000556821 SUPT4H1P63272 117 aaKnown RBP17.05■□□□□ 0.32
PABPN1-207ENST00000556821 ERHP84090 104 aaKnown RBP17.05■□□□□ 0.32
PABPN1-207ENST00000556821 TMEM187Q14656 261 aa17.05■□□□□ 0.32
PABPN1-207ENST00000556821 SPSB3Q6PJ21 355 aa17.05■□□□□ 0.32
PABPN1-207ENST00000556821 SGPP2Q8IWX5 399 aa17.05■□□□□ 0.32
PABPN1-207ENST00000556821 TMEM61Q8N0U2 210 aa17.05■□□□□ 0.32
PABPN1-207ENST00000556821 UBAC2Q8NBM4 344 aa17.05■□□□□ 0.32
PABPN1-207ENST00000556821 WDR89Q96FK6 387 aaPredicted RBP17.05■□□□□ 0.32
PABPN1-207ENST00000556821 IGHV3-48P01763 117 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 CTSGP08311 255 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 RNASE2P10153 161 aaKnown RBP17.04■□□□□ 0.32
PABPN1-207ENST00000556821 ELLP55199 621 aaPredicted RBP17.04■□□□□ 0.32
PABPN1-207ENST00000556821 Q56UQ5 140 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 PVRIGQ6DKI7 326 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 GTSCR1Q86UQ5 136 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 TOMM5Q8N4H5 51 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 GPR146Q96CH1 333 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 SCGB3A2Q96PL1 93 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 PDCD10Q9BUL8 212 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 SRRQ9GZT4 340 aa17.04■□□□□ 0.32
PABPN1-207ENST00000556821 FCGR2BP31994 310 aaPredicted RBP17.03■□□□□ 0.32
PABPN1-207ENST00000556821 FAUP35544 74 aaKnown RBP17.03■□□□□ 0.32
PABPN1-207ENST00000556821 BTNL8Q6UX41 500 aa17.03■□□□□ 0.32
PABPN1-207ENST00000556821 PALMDQ9NP74 551 aa17.03■□□□□ 0.32
PABPN1-207ENST00000556821 CACNG5Q9UF02 275 aa17.03■□□□□ 0.32
PABPN1-207ENST00000556821 NDUFA4O00483 81 aa17.02■□□□□ 0.32
PABPN1-207ENST00000556821 CD7P09564 240 aa17.02■□□□□ 0.32
PABPN1-207ENST00000556821 AKR1C4P17516 323 aa17.02■□□□□ 0.32
PABPN1-207ENST00000556821 HOXA1P49639 335 aaPredicted RBP17.02■□□□□ 0.32
PABPN1-207ENST00000556821 AP3S2P59780 193 aa17.02■□□□□ 0.32
PABPN1-207ENST00000556821 MARC2Q969Z3 335 aa17.02■□□□□ 0.32
PABPN1-207ENST00000556821 PINX1Q96BK5 328 aaKnown RBP17.02■□□□□ 0.32
PABPN1-207ENST00000556821 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.02■□□□□ 0.32
PABPN1-207ENST00000556821 MRPL27Q9P0M9 148 aaKnown RBP17.02■□□□□ 0.32
PABPN1-207ENST00000556821 UFC1Q9Y3C8 167 aa17.02■□□□□ 0.32
PABPN1-207ENST00000556821 IGHV3OR16-8A0A075B7F1 116 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 LCE6AA0A183 80 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 SNCAP37840 140 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 MFAP4P55083 255 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 CD81P60033 236 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 GUCA2BQ16661 112 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 BSXQ3C1V8 233 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 SPANXN2Q5MJ10 180 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 ZNF57Q68EA5 555 aaPredicted RBP17.01■□□□□ 0.31
PABPN1-207ENST00000556821 OR52E5Q8NH55 327 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 IL22RA2Q969J5 263 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 GAR1Q9NY12 217 aaKnown RBP17.01■□□□□ 0.31
PABPN1-207ENST00000556821 KCNIP3Q9Y2W7 256 aa17.01■□□□□ 0.31
PABPN1-207ENST00000556821 SPCS3P61009 180 aa17■□□□□ 0.31
PABPN1-207ENST00000556821 DEDD2Q8WXF8 326 aa17■□□□□ 0.31
PABPN1-207ENST00000556821 TXN2Q99757 166 aa17■□□□□ 0.31
PABPN1-207ENST00000556821 NEURL2Q9BR09 285 aa17■□□□□ 0.31
PABPN1-207ENST00000556821 WFDC10AQ9H1F0 79 aa17■□□□□ 0.31
PABPN1-207ENST00000556821 DAZ1Q9NQZ3 744 aaKnown RBP17■□□□□ 0.31
PABPN1-207ENST00000556821 HUWE1Q7Z6Z7 4374 aaKnown RBP16.99■□□□□ 0.31
PABPN1-207ENST00000556821 NMSQ5H8A3 153 aa16.99■□□□□ 0.31
PABPN1-207ENST00000556821 SDHCQ99643 169 aaPredicted RBP16.99■□□□□ 0.31
PABPN1-207ENST00000556821 TM2D3Q9BRN9 247 aa16.99■□□□□ 0.31
PABPN1-207ENST00000556821 DNAH7Q8WXX0 4024 aa16.98■□□□□ 0.31
PABPN1-207ENST00000556821 A0A0B4J2A0 478 aa16.98■□□□□ 0.31
PABPN1-207ENST00000556821 NUPL2O15504 423 aaKnown RBP16.98■□□□□ 0.31
PABPN1-207ENST00000556821 BAK1Q16611 211 aa16.98■□□□□ 0.31
PABPN1-207ENST00000556821 TMED4Q7Z7H5 227 aa16.98■□□□□ 0.31
PABPN1-207ENST00000556821 MUC7Q8TAX7 377 aa16.98■□□□□ 0.31
PABPN1-207ENST00000556821 C20orf24Q9BUV8 137 aa16.98■□□□□ 0.31
PABPN1-207ENST00000556821 FNDC4Q9H6D8 234 aaPredicted RBP16.98■□□□□ 0.31
PABPN1-207ENST00000556821 ENY2Q9NPA8 101 aa16.98■□□□□ 0.31
PABPN1-207ENST00000556821 MRPL36Q9P0J6 103 aaKnown RBP16.98■□□□□ 0.31
PABPN1-207ENST00000556821 SHPKQ9UHJ6 478 aa16.98■□□□□ 0.31
PABPN1-207ENST00000556821 K7EMT4 169 aa16.97■□□□□ 0.31
PABPN1-207ENST00000556821 CORTO00230 105 aa16.97■□□□□ 0.31
PABPN1-207ENST00000556821 ZNF207O43670 478 aaKnown RBP16.97■□□□□ 0.31
PABPN1-207ENST00000556821 GNG7O60262 68 aa16.97■□□□□ 0.31
PABPN1-207ENST00000556821 SCAF4O95104 1147 aaKnown RBP16.97■□□□□ 0.31
PABPN1-207ENST00000556821 NXPH3O95157 252 aa16.97■□□□□ 0.31
PABPN1-207ENST00000556821 LYZL2Q7Z4W2 148 aa16.97■□□□□ 0.31
PABPN1-207ENST00000556821 RCHY1Q96PM5 261 aa16.97■□□□□ 0.31
PABPN1-207ENST00000556821 SULT1A3P0DMM9 295 aa16.96■□□□□ 0.31
PABPN1-207ENST00000556821 SULT1A4P0DMN0 295 aa16.96■□□□□ 0.31
PABPN1-207ENST00000556821 SUB1P53999 127 aaKnown RBP eCLIP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms