RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 YPEL1O60688 119 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 MED6O75586 246 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 PGLYRP1O75594 196 aaPredicted RBP4.06□□□□□ -1.76
SRP54-211ENST00000556445 LHBP01229 141 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 HBZP02008 142 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 PSG2P11465 335 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 RAB4AP20338 218 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 RPL12P30050 165 aaKnown RBP4.06□□□□□ -1.76
SRP54-211ENST00000556445 CEACAM6P40199 344 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 KIR2DS2P43631 304 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 RAB7AP51149 207 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 AKIRIN2Q53H80 203 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 GCSAMLQ5JQS6 135 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 NCMAPQ5T1S8 102 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 WDR25Q64LD2 544 aaPredicted RBP4.06□□□□□ -1.76
SRP54-211ENST00000556445 ZNF818PQ6ZRF7 136 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 ZNF826PQ6ZT77 177 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 BAP18Q8IXM2 172 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 ZNF645Q8N7E2 425 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 SLC35G3Q8N808 338 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 OR5B3Q8NH48 314 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 OR1S1Q8NH92 325 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 RNASE11Q8TAA1 199 aaKnown RBP4.06□□□□□ -1.76
SRP54-211ENST00000556445 ITLN1Q8WWA0 313 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 ARL11Q969Q4 196 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 FLYWCH2Q96CP2 140 aaKnown RBP4.06□□□□□ -1.76
SRP54-211ENST00000556445 OR10C1Q96KK4 312 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 RCHY1Q96PM5 261 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 YPEL2Q96QA6 119 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 TP53RKQ96S44 253 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 RNF126Q9BV68 326 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 RBKSQ9H477 322 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 CCL28Q9NRJ3 127 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 JPT1Q9UK76 154 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 LSM5Q9Y4Y9 91 aaKnown RBP4.06□□□□□ -1.76
SRP54-211ENST00000556445 PTPRQQ9UMZ3 2332 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 ZNF292O60281 2723 aa4.06□□□□□ -1.76
SRP54-211ENST00000556445 CHD3Q12873 2000 aaKnown RBP4.05□□□□□ -1.76
SRP54-211ENST00000556445 TRGV10A0A0A0MS01 117 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 IGKV1D-13A0A0B4J2D9 117 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 ODAMA1E959 279 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 DPRXA6NFQ7 191 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 ZNF729A6NN14 1252 aaPredicted RBP4.05□□□□□ -1.76
SRP54-211ENST00000556445 SEC14L6B5MCN3 397 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 C12orf77C9JDV5 145 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 CCL21O00585 134 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 FCN1O00602 326 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 MRPS12O15235 138 aaKnown RBP4.05□□□□□ -1.76
SRP54-211ENST00000556445 FGF16O43320 207 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 ZNF737O75373 536 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 FSTL3O95633 263 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 CFDP00746 253 aaPredicted RBP4.05□□□□□ -1.76
SRP54-211ENST00000556445 IGHV1-46P01743 117 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 OR4A8P0C604 315 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 IGKV1-13P0DP09 117 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 DAOP14920 347 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 RPL35AP18077 110 aaKnown RBP4.05□□□□□ -1.76
SRP54-211ENST00000556445 LOXP28300 417 aaPredicted RBP4.05□□□□□ -1.76
SRP54-211ENST00000556445 AKR1C2P52895 323 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 TAS2R30P59541 319 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 TAS2R60P59551 318 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 BSPH1Q075Z2 132 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 BAXQ07812 192 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 AESQ08117 197 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 ZNF266Q14584 549 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 GUK1Q16774 197 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 BSXQ3C1V8 233 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 SP6Q3SY56 376 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 TEX36Q5VZQ5 186 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 ALKAL2Q6UX46 152 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 LYZL2Q7Z4W2 148 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 LRP11Q86VZ4 500 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 STPG2Q8N412 459 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 ZNF383Q8NA42 475 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.05□□□□□ -1.76
SRP54-211ENST00000556445 C22orf15Q8WYQ4 148 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 WFIKKN1Q96NZ8 548 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 HSD17B10Q99714 261 aaKnown RBP4.05□□□□□ -1.76
SRP54-211ENST00000556445 DYNLRB1Q9NP97 96 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 KCNJ16Q9NPI9 418 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 ESM1Q9NQ30 184 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 SDHAF2Q9NX18 166 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 COA4Q9NYJ1 87 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 PRELID3BQ9Y3B1 194 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 SELENOKQ9Y6D0 94 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 COL6A3P12111 3177 aa4.05□□□□□ -1.76
SRP54-211ENST00000556445 KIAA2026Q5HYC2 2103 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 IGKV1D-17A0A075B6S4 117 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 IGHV3-64DA0A0J9YX35 117 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 hADV38S2A0JD32 116 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 MPTX1A8MV57 137 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 LEUTXA8MZ59 168 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 KRBOX1C9JBD0 128 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 J3QLI3 93 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 RBFOX2O43251 390 aaKnown RBP eCLIP4.04□□□□□ -1.76
SRP54-211ENST00000556445 IGHV2-5P01817 119 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 NMBP08949 121 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 OR8U9P0C7N5 309 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 FRMD6-AS1P0C7T7 363 aa4.04□□□□□ -1.76
SRP54-211ENST00000556445 SEC11BP0C7V7 166 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms