RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 C15orf62A8K5M9 175 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 NUDT3O95989 172 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 IL18BPO95998 194 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 CD3EP07766 207 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 GLRXP35754 106 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 COLCA1Q6ZS62 124 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 CACNG8Q8WXS5 425 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 UPK2O00526 184 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 FAM90A1Q86YD7 464 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 C1orf162Q8NEQ5 155 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 COL25A1Q9BXS0 654 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 A0A1W2PRE2 83 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 IGKV1-39P01597 117 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 IGKV1D-39P04432 117 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 SSC4DQ8WTU2 575 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 A0A1B0GUS0 222 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 CKS2P33552 79 aa12.48□□□□□ -0.41
ARHGEF40-207ENST00000556399 DIDO1Q9BTC0 2240 aaKnown RBP12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 FOXH1O75593 365 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 SAA1P0DJI8 122 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 RPP21Q9H633 154 aaKnown RBP12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 AP5S1Q9NUS5 200 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 KIAA1549LQ6ZVL6 1849 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 C9JCJ5 164 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 TRAV3A0A0B4J244 114 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 NTF4P34130 210 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 OR9G1Q8NH87 305 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 MRPL20Q9BYC9 149 aaKnown RBP12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 NUP210Q8TEM1 1887 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 OR2T8A6NH00 312 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 C9orf172C9J069 976 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 PYYP10082 97 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 ARF6P62330 175 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 FDCSPQ8NFU4 85 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 RAB37Q96AX2 223 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 METRNQ9UJH8 293 aa12.47□□□□□ -0.41
ARHGEF40-207ENST00000556399 IGKV1D-33P01593 117 aa12.46□□□□□ -0.41
ARHGEF40-207ENST00000556399 IGKV1-33P01594 117 aa12.46□□□□□ -0.41
ARHGEF40-207ENST00000556399 SMIM17P0DL12 118 aa12.46□□□□□ -0.41
ARHGEF40-207ENST00000556399 GNG5P63218 68 aa12.46□□□□□ -0.41
ARHGEF40-207ENST00000556399 PROK2Q9HC23 129 aa12.46□□□□□ -0.41
ARHGEF40-207ENST00000556399 POLR3KQ9Y2Y1 108 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF40-207ENST00000556399 FAM90A27PA6NNH2 459 aa12.46□□□□□ -0.41
ARHGEF40-207ENST00000556399 SS18L1O75177 396 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF40-207ENST00000556399 OBSL1O75147 1896 aa12.46□□□□□ -0.42
ARHGEF40-207ENST00000556399 TRAV9-2A0A087WT02 112 aa12.46□□□□□ -0.42
ARHGEF40-207ENST00000556399 FBLL1A6NHQ2 334 aaKnown RBP12.46□□□□□ -0.42
ARHGEF40-207ENST00000556399 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.42
ARHGEF40-207ENST00000556399 KIR2DL2P43627 348 aaPredicted RBP12.46□□□□□ -0.42
ARHGEF40-207ENST00000556399 COMPP49747 757 aaPredicted RBP12.46□□□□□ -0.42
ARHGEF40-207ENST00000556399 ERASQ7Z444 233 aa12.46□□□□□ -0.42
ARHGEF40-207ENST00000556399 SPRR3Q9UBC9 169 aa12.46□□□□□ -0.42
ARHGEF40-207ENST00000556399 M0QZ24 198 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 LGALS7P47929 136 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 TDGF1P3P51864 188 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 C9orf106Q8NAJ2 232 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 THADAQ6YHU6 1953 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 TM4SF5O14894 197 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 DPF1Q92782 380 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 COQ2Q96H96 371 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 DOCK11Q5JSL3 2073 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 DOCK8Q8NF50 2099 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 PRCDQ00LT1 54 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 TCF24Q7RTU0 167 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 GUCD1Q96NT3 240 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 GPR82Q96P67 336 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 SNHG12Q9BXW3 62 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 CLEC5AQ9NY25 188 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 HAPLN4Q86UW8 402 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 MYO7BQ6PIF6 2116 aa12.45□□□□□ -0.42
ARHGEF40-207ENST00000556399 TIMM23BQ5SRD1 257 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 ALKBH7Q9BT30 221 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 SNAI2O43623 268 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 CD69Q07108 199 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 PRR7Q8TB68 274 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 GVINP1Q7Z2Y8 2422 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 MYOZ3Q8TDC0 251 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 MBNL3Q9NUK0 354 aaKnown RBP12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 DOCK7Q96N67 2140 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 GFRA3O60609 400 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 TMUB1Q9BVT8 246 aa12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 PEF1Q9UBV8 284 aaKnown RBP12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 SOX21Q9Y651 276 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF40-207ENST00000556399 TRAV5A0A0B4J249 113 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 ZNF207O43670 478 aaKnown RBP12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 FABP2P12104 132 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 TMEM208Q9BTX3 173 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 FER1L5A0AVI2 2057 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 APOHP02749 345 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 SCGB1C2P0DMR2 95 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 SFTPCP11686 197 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 FMC1Q96HJ9 113 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 PMCHL2Q9BQD1 86 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 CRIM1Q9NZV1 1036 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 RBPMS2Q6ZRY4 209 aaKnown RBP12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 CD177Q8N6Q3 437 aa12.43□□□□□ -0.42
ARHGEF40-207ENST00000556399 UCNP55089 124 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms