RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 SRPXP78539 464 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 Q56UQ5 140 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 TRIQKQ629K1 86 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 ZNF57Q68EA5 555 aaPredicted RBP8.73□□□□□ -1.01
SLIRP-206ENST00000556375 UNQ9165/PRO28630Q6UXU0 137 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 Q6ZRM9 215 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 OR52E5Q8NH55 327 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 TMEM190Q8WZ59 177 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 MARC2Q969Z3 335 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 ENY2Q9NPA8 101 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
SLIRP-206ENST00000556375 GAR1Q9NY12 217 aaKnown RBP8.73□□□□□ -1.01
SLIRP-206ENST00000556375 TECRQ9NZ01 308 aaKnown RBP8.73□□□□□ -1.01
SLIRP-206ENST00000556375 CACNG5Q9UF02 275 aa8.73□□□□□ -1.01
SLIRP-206ENST00000556375 A0A0B4J2A0 478 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 PIGBOS1A0A0B4J2F0 54 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 IZUMO1RA6ND01 250 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 CORTO00230 105 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 MT-CO2P00403 227 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 NHLRC4P0CG21 123 aaPredicted RBP8.72□□□□□ -1.01
SLIRP-206ENST00000556375 RNASE2P10153 161 aaKnown RBP8.72□□□□□ -1.01
SLIRP-206ENST00000556375 CBLN1P23435 193 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 MFAP4P55083 255 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 DEFB114Q30KQ6 69 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 CD300EQ496F6 205 aaPredicted RBP8.72□□□□□ -1.01
SLIRP-206ENST00000556375 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 C11orf87Q6NUJ2 197 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 TMED4Q7Z7H5 227 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 GTSCR1Q86UQ5 136 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 Q8N1Y9 231 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 UBAC2Q8NBM4 344 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 CACNG8Q8WXS5 425 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 GPR146Q96CH1 333 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 TXN2Q99757 166 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 CHRDL1Q9BU40 450 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 PRR13Q9NZ81 148 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 CACFD1Q9UGQ2 172 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 SHPKQ9UHJ6 478 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 UFC1Q9Y3C8 167 aa8.72□□□□□ -1.01
SLIRP-206ENST00000556375 IGHV3-35A0A0C4DH35 117 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 NAP1L6A6NFF2 107 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 NDUFA4O00483 81 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 SULT1A3P0DMM9 295 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 SULT1A4P0DMN0 295 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 ADMP35318 185 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 INPP1P49441 399 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 SUB1P53999 127 aaKnown RBP eCLIP8.71□□□□□ -1.02
SLIRP-206ENST00000556375 RBMS2Q15434 407 aaKnown RBP8.71□□□□□ -1.02
SLIRP-206ENST00000556375 BAK1Q16611 211 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 BSXQ3C1V8 233 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 TMEM128Q5BJH2 165 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 NMSQ5H8A3 153 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 LGI3Q8N145 548 aa8.71□□□□□ -1.02
SLIRP-206ENST00000556375 PINX1Q96BK5 328 aaKnown RBP8.71□□□□□ -1.02
SLIRP-206ENST00000556375 SDHCQ99643 169 aaPredicted RBP8.71□□□□□ -1.02
SLIRP-206ENST00000556375 DAZ1Q9NQZ3 744 aaKnown RBP8.71□□□□□ -1.02
SLIRP-206ENST00000556375 HUWE1Q7Z6Z7 4374 aaKnown RBP8.7□□□□□ -1.02
SLIRP-206ENST00000556375 DUXBA0A1W2PPF3 345 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 A8MZ25 164 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 NUPL2O15504 423 aaKnown RBP8.7□□□□□ -1.02
SLIRP-206ENST00000556375 CTSGP08311 255 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 FRMD6-AS1P0C7T7 363 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 C8orf88P0DMB2 117 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 IGHV4-30-4P0DP06 118 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 VAMP1P23763 118 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 HTR2BP41595 481 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 CCR6P51684 374 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 RELQ04864 619 aaPredicted RBP8.7□□□□□ -1.02
SLIRP-206ENST00000556375 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 BTNL8Q6UX41 500 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 CENPSQ8N2Z9 138 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 UXS1Q8NBZ7 420 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 MRPL27Q9P0M9 148 aaKnown RBP8.7□□□□□ -1.02
SLIRP-206ENST00000556375 MLXQ9UH92 298 aa8.7□□□□□ -1.02
SLIRP-206ENST00000556375 ZNF785A8K8V0 405 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 GNG7O60262 68 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 IGHV3-48P01763 117 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 IL7P13232 177 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 NPBWR1P48145 328 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 UBE2MP61081 183 aaKnown RBP8.69□□□□□ -1.02
SLIRP-206ENST00000556375 SMCO1Q147U7 214 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 LYZL2Q7Z4W2 148 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 TMEM61Q8N0U2 210 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 LRTM2Q8N967 370 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 WDR89Q96FK6 387 aaPredicted RBP8.69□□□□□ -1.02
SLIRP-206ENST00000556375 ZNF414Q96IQ9 312 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 ASCL2Q99929 193 aa8.69□□□□□ -1.02
SLIRP-206ENST00000556375 C7orf50Q9BRJ6 194 aaKnown RBP8.69□□□□□ -1.02
SLIRP-206ENST00000556375 HEYLQ9NQ87 328 aaPredicted RBP8.69□□□□□ -1.02
SLIRP-206ENST00000556375 TENM3Q9P273 2699 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 TRAV25A0A0B4J276 109 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 A0A1B0GU03 582 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 C15orf62A8K5M9 175 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 CENPXA8MT69 81 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 K7EMT4 169 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 NDUFB6O95139 128 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 SFT2D2O95562 160 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 OPRK1P41145 380 aa8.68□□□□□ -1.02
SLIRP-206ENST00000556375 CD81P60033 236 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms