RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SRRQ9GZT4 340 aa8.76□□□□□ -1.01
SLIRP-205ENST00000556310 C21orf62Q9NYP8 219 aa8.76□□□□□ -1.01
SLIRP-205ENST00000556310 SMAD5-AS1Q9Y6J3 95 aa8.76□□□□□ -1.01
SLIRP-205ENST00000556310 TGOLN2O43493 480 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 IFNA17P01571 189 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 ERHP84090 104 aaKnown RBP8.75□□□□□ -1.01
SLIRP-205ENST00000556310 AARDQ4LEZ3 155 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 SPINK9Q5DT21 86 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 TMEM268Q5VZI3 342 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 PLET1Q6UQ28 207 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 ADAMTSL5Q6ZMM2 481 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 SELENOHQ8IZQ5 122 aaKnown RBP8.75□□□□□ -1.01
SLIRP-205ENST00000556310 DYNLRB2Q8TF09 96 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 SCARB1Q8WTV0 552 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 IL22RA2Q969J5 263 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 BSCL2Q96G97 398 aaPredicted RBP8.75□□□□□ -1.01
SLIRP-205ENST00000556310 KCNIP3Q9Y2W7 256 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 TMEM56-RWDD3S4R434 201 aa8.75□□□□□ -1.01
SLIRP-205ENST00000556310 IGHV3-21A0A0B4J1V1 117 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 TMEM213A2RRL7 107 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 OR2T8A6NH00 312 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 FOLR2P14207 255 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 HOXA1P49639 335 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-205ENST00000556310 SUPT4H1P63272 117 aaKnown RBP8.74□□□□□ -1.01
SLIRP-205ENST00000556310 TMEM187Q14656 261 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 MISP3Q96FF7 219 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 SLC25A21Q9BQT8 299 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-205ENST00000556310 ZNF436Q9C0F3 470 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-205ENST00000556310 PALMDQ9NP74 551 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 ZC4H2Q9NQZ6 224 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
SLIRP-205ENST00000556310 ZNF320A2RRD8 509 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 I3L2K1 104 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 ANXA3P12429 323 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 AKR1C4P17516 323 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 EDN2P20800 178 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 FCGR2BP31994 310 aaPredicted RBP8.73□□□□□ -1.01
SLIRP-205ENST00000556310 ADMP35318 185 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 SNCAP37840 140 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 ELLP55199 621 aaPredicted RBP8.73□□□□□ -1.01
SLIRP-205ENST00000556310 SPCS3P61009 180 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 SRPXP78539 464 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 Q56UQ5 140 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 TRIQKQ629K1 86 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 ZNF57Q68EA5 555 aaPredicted RBP8.73□□□□□ -1.01
SLIRP-205ENST00000556310 UNQ9165/PRO28630Q6UXU0 137 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 Q6ZRM9 215 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 OR52E5Q8NH55 327 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 TMEM190Q8WZ59 177 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 MARC2Q969Z3 335 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 ANAPC16Q96DE5 110 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 ENY2Q9NPA8 101 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
SLIRP-205ENST00000556310 GAR1Q9NY12 217 aaKnown RBP8.73□□□□□ -1.01
SLIRP-205ENST00000556310 TECRQ9NZ01 308 aaKnown RBP8.73□□□□□ -1.01
SLIRP-205ENST00000556310 CACNG5Q9UF02 275 aa8.73□□□□□ -1.01
SLIRP-205ENST00000556310 A0A0B4J2A0 478 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 PIGBOS1A0A0B4J2F0 54 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 IZUMO1RA6ND01 250 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 CORTO00230 105 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 MT-CO2P00403 227 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 NHLRC4P0CG21 123 aaPredicted RBP8.72□□□□□ -1.01
SLIRP-205ENST00000556310 RNASE2P10153 161 aaKnown RBP8.72□□□□□ -1.01
SLIRP-205ENST00000556310 CBLN1P23435 193 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 MFAP4P55083 255 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 DEFB114Q30KQ6 69 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 CD300EQ496F6 205 aaPredicted RBP8.72□□□□□ -1.01
SLIRP-205ENST00000556310 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 C11orf87Q6NUJ2 197 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 TMED4Q7Z7H5 227 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 GTSCR1Q86UQ5 136 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 Q8N1Y9 231 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 UBAC2Q8NBM4 344 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 CACNG8Q8WXS5 425 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 GPR146Q96CH1 333 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 TXN2Q99757 166 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 CHRDL1Q9BU40 450 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 PRR13Q9NZ81 148 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 CACFD1Q9UGQ2 172 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 SHPKQ9UHJ6 478 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 UFC1Q9Y3C8 167 aa8.72□□□□□ -1.01
SLIRP-205ENST00000556310 IGHV3-35A0A0C4DH35 117 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 NAP1L6A6NFF2 107 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 NDUFA4O00483 81 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 SULT1A3P0DMM9 295 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 SULT1A4P0DMN0 295 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 INPP1P49441 399 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 SUB1P53999 127 aaKnown RBP eCLIP8.71□□□□□ -1.02
SLIRP-205ENST00000556310 RBMS2Q15434 407 aaKnown RBP8.71□□□□□ -1.02
SLIRP-205ENST00000556310 BAK1Q16611 211 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 BSXQ3C1V8 233 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 TMEM128Q5BJH2 165 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 NMSQ5H8A3 153 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 LGI3Q8N145 548 aa8.71□□□□□ -1.02
SLIRP-205ENST00000556310 PINX1Q96BK5 328 aaKnown RBP8.71□□□□□ -1.02
SLIRP-205ENST00000556310 SDHCQ99643 169 aaPredicted RBP8.71□□□□□ -1.02
SLIRP-205ENST00000556310 DAZ1Q9NQZ3 744 aaKnown RBP8.71□□□□□ -1.02
SLIRP-205ENST00000556310 HUWE1Q7Z6Z7 4374 aaKnown RBP8.7□□□□□ -1.02
SLIRP-205ENST00000556310 DUXBA0A1W2PPF3 345 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms