RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 KCNIP3Q9Y2W7 256 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 PAM16Q9Y3D7 125 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 OR51B2Q9Y5P1 312 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 IGHV3-21A0A0B4J1V1 117 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 A0A0G2JLM5 398 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TEX50A0A1B0GTY4 177 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 CENPXA8MT69 81 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 SEC14L6B5MCN3 397 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 UPK2O00526 184 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 CTDSPLO15194 276 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 OR2J3O76001 311 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TPPPO94811 219 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 ATG12O94817 140 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 DHFRP00374 187 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 IFNA17P01571 189 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 HSPB1P04792 205 aaKnown RBP3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TRAPPC2P0DI81 140 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TRAPPC2BP0DI82 140 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 HLA-GP17693 338 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 PSMB8P28062 276 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 MAS1LP35410 378 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 AKR1C2P52895 323 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 BRWD1-AS2P59051 145 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TAS2R31P59538 309 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 AP3S2P59780 193 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 OR2B8PP59922 312 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 RHOGP84095 191 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 NDPQ00604 133 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 ZNF45Q02386 682 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 SSBP1Q04837 148 aaKnown RBP3.59□□□□□ -1.83
ATXN3-238ENST00000556288 BAK1Q16611 211 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TATDN3Q17R31 274 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 IZUMO4Q1ZYL8 232 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 SPINK9Q5DT21 86 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 VAX1Q5SQQ9 334 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TRIQKQ629K1 86 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TMED4Q7Z7H5 227 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 SLC25A42Q86VD7 318 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 SGPP2Q8IWX5 399 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 CENPSQ8N2Z9 138 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 ARRDC1Q8N5I2 433 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TCTEX1D1Q8N7M0 179 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 ADAD2Q8NCV1 583 aaKnown RBP3.59□□□□□ -1.83
ATXN3-238ENST00000556288 OR10W1Q8NGF6 305 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 OR4C16Q8NGL9 310 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 OR6Q1Q8NGQ2 317 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 OR13C8Q8NGS7 320 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 TMEM167AQ8TBQ9 72 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 SMIM4Q8WVI0 70 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 DCUN1D4Q92564 292 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 RRNAD1Q96FB5 475 aaKnown RBP3.59□□□□□ -1.83
ATXN3-238ENST00000556288 UBE2E2Q96LR5 201 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 SCGB3A2Q96PL1 93 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 PRRT1Q99946 306 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 PDCD10Q9BUL8 212 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 NXF2Q9GZY0 626 aaKnown RBP3.59□□□□□ -1.83
ATXN3-238ENST00000556288 ENY2Q9NPA8 101 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 ZC4H2Q9NQZ6 224 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 SLC2A9Q9NRM0 540 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 ANAPC10Q9UM13 185 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 NBEAL1Q6ZS30 2694 aa3.59□□□□□ -1.83
ATXN3-238ENST00000556288 IGHV4OR15-8A0A075B7B6 117 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 A0A087WW49 117 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 IGHV4-28A0A0C4DH34 117 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 ANKRD20A5PA0PJZ0 165 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 ZNF320A2RRD8 509 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 E7EUB6 86 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 LINC01619G3V211 115 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 OVOL1O14753 267 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 CYB5BO43169 146 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 GSTZ1O43708 216 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 SOX15O60248 233 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 SAP30O75446 220 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 CD74P04233 296 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 CTSDP07339 412 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 OR8U8P0C7N1 319 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 ZNF735P0CB33 412 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 AREGP15514 252 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 TBPP20226 339 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 EDN2P20800 178 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 ETV6P41212 452 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 ZNF616Q08AN1 781 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 MSMO1Q15800 293 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 ZNF585BQ52M93 769 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 CLEC19AQ6UXS0 136 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 C19orf35Q6ZS72 473 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 PUSL1Q8N0Z8 303 aaKnown RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 TTC9CQ8N5M4 171 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 UBAC2Q8NBM4 344 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 OR4A5Q8NH83 315 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 C4orf3Q8WVX3 66 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 MRGPRFQ96AM1 343 aa3.58□□□□□ -1.84
ATXN3-238ENST00000556288 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-238ENST00000556288 TMEM68Q96MH6 324 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms