RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 CDK1P06493 297 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 NEFHP12036 1026 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 ZNF32P17041 273 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 CXCR1P25024 350 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 PSMB8P28062 276 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 RCVRNP35243 200 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 POLR2IP36954 125 aaKnown RBP1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 CBX5P45973 191 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 IDH2P48735 452 aaKnown RBP1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 TGM4P49221 684 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 TAS2R31P59538 309 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 GRB2P62993 217 aaKnown RBP1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 PSG4Q00888 419 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 DNAL1Q4LDG9 190 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 YIF1BQ5BJH7 314 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 UBE2NLQ5JXB2 153 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 TEX36Q5VZQ5 186 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 ZNF773Q6PK81 442 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 CLEC19AQ6UXS0 136 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 GRINAQ7Z429 371 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 C11orf53Q8IXP5 236 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 ENTHD1Q8IYW4 607 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 ZNF563Q8TA94 476 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 CASTOR1Q8WTX7 329 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 OR5P2Q8WZ92 322 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 PPP1R14BQ96C90 147 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 MALSU1Q96EH3 234 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 MRAP2Q96G30 205 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 CYYR1Q96J86 154 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 PGLYRP3Q96LB9 341 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 OR4C12Q96R67 309 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 ANAPC13Q9BS18 74 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 GGTLC1Q9BX51 225 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 SLC25A31Q9H0C2 315 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 C19orf12Q9NSK7 152 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 COMMD9Q9P000 198 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 HHLA2Q9UM44 414 aa1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 PUS1Q9Y606 427 aaKnown RBP eCLIP1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
EFCAB11-210ENST00000556078 IGKV1D-43A0A0B4J1Z2 117 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 RBFOX3A6NFN3 312 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 EFCAB9A8MZ26 197 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 CENPBD1B2RD01 187 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 H3BP45 60 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 ITGB1BP1O14713 200 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 TAAR5O14804 337 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 PFDN6O15212 129 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 MPZL2O60487 215 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 ADAP1O75689 374 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 KLHL2O95198 593 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 IFNA10P01566 189 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 IGHG2P01859 326 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 S100A6P06703 90 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 LIMS3P0CW19 117 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 LIMS4P0CW20 117 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 IGHV1-8P0DP01 117 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 ATF1P18846 271 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 PRPS1L1P21108 318 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 SERPINB1P30740 379 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 MPIP34949 423 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 PRSS3P35030 304 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 CDC34P49427 236 aaPredicted RBP1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 SRP9P49458 86 aaKnown RBP1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 PSMD7P51665 324 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 ZNF133P52736 654 aaPredicted RBP1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 SLC18A1P54219 525 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 DLX6P56179 175 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 RUNX1Q01196 453 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 CD164Q04900 197 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 MADCAM1Q13477 382 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 AP1ARQ63HQ0 302 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 RPS27LQ71UM5 84 aaKnown RBP1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 WDR86Q86TI4 376 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 PDPNQ86YL7 162 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 C5orf56Q8N8D9 126 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 CYB561D1Q8N8Q1 229 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 OR13G1Q8NGZ3 307 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 DYNC2LI1Q8TCX1 351 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 C16orf78Q8WTQ4 265 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 C15orf40Q8WUR7 153 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 TWIST2Q8WVJ9 160 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 SLC7A6Q92536 515 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 DDIT4LQ96D03 193 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 ZNF799Q96GE5 643 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 GAFA1Q96PS6 74 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 PAIP2Q9BPZ3 127 aaKnown RBP1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 CHAC1Q9BUX1 264 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 OR52D1Q9H346 318 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 C12orf10Q9HB07 376 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 RHOFQ9HBH0 211 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 USE1Q9NZ43 259 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 TFR2Q9UP52 801 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 NDUFAF1Q9Y375 327 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 POLR3HQ9Y535 204 aaPredicted RBP1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 LRRC42Q9Y546 428 aa1.88□□□□□ -2.11
EFCAB11-210ENST00000556078 IGKV1-27A0A075B6S5 117 aa1.87□□□□□ -2.11
EFCAB11-210ENST00000556078 LOC102724200A0A096LPH7 203 aaPredicted RBP1.87□□□□□ -2.11
EFCAB11-210ENST00000556078 TRAV38-1A0A0B4J264 116 aa1.87□□□□□ -2.11
EFCAB11-210ENST00000556078 NBDYA0A0U1RRE5 68 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms