RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 RYR1P21817 5038 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 A0A1B0GU03 582 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 SNAPC5O75971 98 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 DFFBO76075 338 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 YIF1AO95070 293 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 PRCDQ00LT1 54 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 IZUMO4Q1ZYL8 232 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 PHLDA2Q53GA4 152 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 LEMD1Q68G75 181 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 PVRIGQ6DKI7 326 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 BORCS5Q969J3 196 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 MISP3Q96FF7 219 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 C6orf62Q9GZU0 229 aaPredicted RBP10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 MFFQ9GZY8 342 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 FAM212BQ9NTI7 297 aaPredicted RBP10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 FKBP11Q9NYL4 201 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 MRPL36Q9P0J6 103 aaKnown RBP10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 DNAH11Q96DT5 4516 aa10.42□□□□□ -0.74
CHMP4BP1-201ENST00000556017 A0A1B0GVY2 172 aa10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 P0C879 139 aa10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 HRH1P35367 487 aa10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 CMC4P56277 68 aaPredicted RBP10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TAS2R20P59543 309 aa10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 DEFB131AP59861 70 aa10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 C2CD4CQ8TF44 421 aa10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 YTHDF1Q9BYJ9 559 aaKnown RBP10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 IFT46Q9NQC8 304 aa10.41□□□□□ -0.74
CHMP4BP1-201ENST00000556017 IGHV3-66A0A0C4DH42 116 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 IFNA4P05014 189 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 C4BPBP20851 252 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 RPS19P39019 145 aaKnown RBP10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TCTAP57738 103 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TMEM187Q14656 261 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TRPT1Q86TN4 253 aaKnown RBP10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TBC1D26Q86UD7 250 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 CMTM1Q8IZ96 169 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 OR5H2Q8NGV7 314 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 OR6F1Q8NGZ6 308 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 GPX8Q8TED1 209 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 MRGPRFQ96AM1 343 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TSC22D3Q99576 134 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 HRH4Q9H3N8 390 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 X6R8D5 127 aa10.4□□□□□ -0.74
CHMP4BP1-201ENST00000556017 ELOA3CA0A087WX78 387 aaPredicted RBP10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 TRAV2A0A0B4J234 112 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 IGHV4-28A0A0C4DH34 117 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 GNG7O60262 68 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 TMEM127O75204 238 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 TMEM50AO95807 157 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 IGKV1-5P01602 117 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 HLA-DMAP28067 261 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 TAS2R46P59540 309 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 HSPE1P61604 102 aaKnown RBP10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 SPINK9Q5DT21 86 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 UBE2NLQ5JXB2 153 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 CSNK1G2-AS1Q8NCQ2 148 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 S100A16Q96FQ6 103 aaKnown RBP10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 FNDC4Q9H6D8 234 aaPredicted RBP10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 PUS1Q9Y606 427 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 MUC4Q99102 2169 aa10.39□□□□□ -0.75
CHMP4BP1-201ENST00000556017 A0A0B4J293 547 aa10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 ZNF705EA8MWA4 302 aaPredicted RBP10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 IGLL5B9A064 214 aa10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 INS-IGF2F8WCM5 200 aa10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 K7EQG2 157 aa10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 EIF4EP06730 217 aaKnown RBP10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 NEDD8Q15843 81 aa10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 TMEM69Q5SWH9 247 aa10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 SAMD12Q8N8I0 201 aa10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 PINX1Q96BK5 328 aaKnown RBP10.38□□□□□ -0.75
CHMP4BP1-201ENST00000556017 CD5P06127 495 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 HLA-DMBP28068 263 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 PRSS3P35030 304 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 UCP3P55916 312 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 MLANAQ16655 118 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 ZNF600Q6ZNG1 722 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 Q6ZTC4 211 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 H2BFWTQ7Z2G1 175 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 TSPAN14Q8NG11 270 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 DCANP1Q8TF63 244 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 CMTM3Q96MX0 182 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 GINS3Q9BRX5 216 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 SCRT1Q9BWW7 348 aa10.37□□□□□ -0.75
CHMP4BP1-201ENST00000556017 C11orf94C9JXX5 98 aa10.36□□□□□ -0.75
CHMP4BP1-201ENST00000556017 IGKV1-17P01599 117 aa10.36□□□□□ -0.75
CHMP4BP1-201ENST00000556017 CRYBB3P26998 211 aa10.36□□□□□ -0.75
CHMP4BP1-201ENST00000556017 PPP5CP53041 499 aa10.36□□□□□ -0.75
CHMP4BP1-201ENST00000556017 PAFAH1B2P68402 229 aa10.36□□□□□ -0.75
CHMP4BP1-201ENST00000556017 DUSP18Q8NEJ0 188 aa10.36□□□□□ -0.75
CHMP4BP1-201ENST00000556017 OR4A16Q8NH70 328 aa10.36□□□□□ -0.75
CHMP4BP1-201ENST00000556017 CELA1Q9UNI1 258 aa10.36□□□□□ -0.75
CHMP4BP1-201ENST00000556017 A0A0G2JRQ6 117 aa10.35□□□□□ -0.75
CHMP4BP1-201ENST00000556017 KNCNA6PVL3 124 aa10.35□□□□□ -0.75
CHMP4BP1-201ENST00000556017 ATP6V1G2O95670 118 aa10.35□□□□□ -0.75
CHMP4BP1-201ENST00000556017 NPBWR1P48145 328 aa10.35□□□□□ -0.75
CHMP4BP1-201ENST00000556017 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
CHMP4BP1-201ENST00000556017 YIPF6Q96EC8 236 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms