RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CRYBB3P26998 211 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 IER3P46695 156 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 SUB1P53999 127 aaKnown RBP eCLIP5.71□□□□□ -1.5
TDP1-213ENST00000555880 TAS2R60P59551 318 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 RPL8P62917 257 aaKnown RBP5.71□□□□□ -1.5
TDP1-213ENST00000555880 KRTCAP3Q53RY4 240 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 UNQ6494/PRO21346Q6UXR6 183 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 Q6ZS92 163 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 ZNF833PQ6ZTB9 187 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 ASCL5Q7RTU5 278 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 TMEM256Q8N2U0 113 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 RPRMLQ8N4K4 120 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 VSTM2AQ8TAG5 236 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 RND1Q92730 232 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 ZNF714Q96N38 554 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 C2orf88Q9BSF0 95 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 A0A1B0GV90 55 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 A0A1W2PRE2 83 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 GRIFINA4D1Z8 144 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 ZNF705FA8MVS1 300 aaPredicted RBP5.7□□□□□ -1.5
TDP1-213ENST00000555880 SNURFLB1AK76 121 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 MMP23AO75900 390 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 ZNF705DP0CH99 300 aaPredicted RBP5.7□□□□□ -1.5
TDP1-213ENST00000555880 ZNF705BP0CI00 300 aaPredicted RBP5.7□□□□□ -1.5
TDP1-213ENST00000555880 C8orf88P0DMB2 117 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 RNASE2P10153 161 aaKnown RBP5.7□□□□□ -1.5
TDP1-213ENST00000555880 CEACAM8P31997 349 aaPredicted RBP5.7□□□□□ -1.5
TDP1-213ENST00000555880 BPIFB3P59826 476 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 RAB4BP61018 213 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 UBE2L3P68036 154 aaKnown RBP5.7□□□□□ -1.5
TDP1-213ENST00000555880 CCL8P80075 99 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 CD69Q07108 199 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 FAM27E3Q08E93 113 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 OR8I2Q8N0Y5 310 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 OR10X1Q8NGY0 326 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 OR4A5Q8NH83 315 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 FAM57AQ8TBR7 257 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 FLYWCH2Q96CP2 140 aaKnown RBP5.7□□□□□ -1.5
TDP1-213ENST00000555880 FAM122AQ96E09 287 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 WFIKKN1Q96NZ8 548 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 GNB1LQ9BYB4 327 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 MRPL20Q9BYC9 149 aaKnown RBP5.7□□□□□ -1.5
TDP1-213ENST00000555880 SAMD10Q9BYL1 202 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 OSTCQ9NRP0 149 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 V9GYV3 84 aa5.7□□□□□ -1.5
TDP1-213ENST00000555880 A0A1B0GUS0 222 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 SRRM4A7MD48 611 aaKnown RBP5.69□□□□□ -1.5
TDP1-213ENST00000555880 VSTM5A8MXK1 200 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 COX7A2P2O60397 106 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 MGST1P10620 155 aaKnown RBP5.69□□□□□ -1.5
TDP1-213ENST00000555880 OR5I1Q13606 314 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 TMEM177Q53S58 311 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 C1orf194Q5T5A4 169 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 SSX8Q7RTT4 187 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 DOLPP1Q86YN1 238 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 WFDC8Q8IUA0 241 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 OR10W1Q8NGF6 305 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 OR4C13Q8NGP0 309 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 OR1L4Q8NGR5 311 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 OR9G1Q8NH87 305 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 H1FXQ92522 213 aaKnown RBP5.69□□□□□ -1.5
TDP1-213ENST00000555880 SAP30LQ9HAJ7 183 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 TPSG1Q9NRR2 321 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 NDUFA4L2Q9NRX3 87 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 NAT8BQ9UHF3 227 aa5.69□□□□□ -1.5
TDP1-213ENST00000555880 IGKV1OR2-108A0A075B7D4 117 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 C17orf100A8MU93 164 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 GGTLC3B5MD39 225 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 INS-IGF2F8WCM5 200 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 H0YJW9 148 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 C16orf97H3BN30 126 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 ISLRO14498 428 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 NDUFB3O43676 98 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 SERF1AO75920 110 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 ESDP10768 282 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 GATA2P23769 480 aaPredicted RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 CHRNB4P30926 498 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 PPOXP50336 477 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 SUMO1P63165 101 aaKnown RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 CX3CL1P78423 397 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 Q0VG73 95 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 LRRC10Q5BKY1 277 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 IBA57Q5T440 356 aaKnown RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 C10orf113Q5VZT2 155 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 FAM71F2Q6NXP2 309 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 TOMM20LQ6UXN7 152 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 MOB3BQ86TA1 216 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 PDPNQ86YL7 162 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 SIGLECL1Q8N7X8 197 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 OR5AU1Q8NGC0 362 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 OR5AN1Q8NGI8 311 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 SNRNP40Q96DI7 357 aaKnown RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 TBX15Q96SF7 602 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 SLC25A33Q9BSK2 321 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 ZNF430Q9H8G1 570 aaPredicted RBP5.68□□□□□ -1.5
TDP1-213ENST00000555880 DNAJC4Q9NNZ3 241 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 SERTAD4Q9NUC0 356 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 TMEM106BQ9NUM4 274 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 PPIAL4EA0A075B759 164 aa5.68□□□□□ -1.5
TDP1-213ENST00000555880 KIR2DL5BA0A0G2JN68 375 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms