RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 SAP30LQ9HAJ7 183 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 ZNRD1Q9P1U0 126 aa10.95□□□□□ -0.66
SHMT2-222ENST00000555774 BDP1A6H8Y1 2624 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 URB1O60287 2271 aaKnown RBP10.94□□□□□ -0.66
SHMT2-222ENST00000555774 A0A0G2JNJ9 132 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 DPRXA6NFQ7 191 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 FCN1O00602 326 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 TNFRSF13BO14836 293 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-222ENST00000555774 NDUFB3O43676 98 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 SCGB1D1O95968 90 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 CHRNB4P30926 498 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 ZNF137PP52743 207 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 LRRC10Q5BKY1 277 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 WFDC8Q8IUA0 241 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 OR10W1Q8NGF6 305 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 OR10X1Q8NGY0 326 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 IGF2BP2-AS1Q96M15 143 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 ZNF430Q9H8G1 570 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-222ENST00000555774 DNAJC4Q9NNZ3 241 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 Q9UFV3 132 aa10.94□□□□□ -0.66
SHMT2-222ENST00000555774 CCL3L1P16619 93 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 GATA2P23769 480 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-222ENST00000555774 BPIFB3P59826 476 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 OR5I1Q13606 314 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 C1orf194Q5T5A4 169 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 FAM167A-AS1Q96KT0 104 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 SLC25A2Q9BXI2 301 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 TP53TG3Q9ULZ0 132 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 WASHC3Q9Y3C0 194 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 CELSR3Q9NYQ7 3312 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 KIR2DL5BA0A0G2JN68 375 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 KIR2DL5BA0A0G2JPC4 375 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 SNURFLB1AK76 121 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 K7EM74 188 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 NUPR1O60356 82 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 IER3P46695 156 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 DOLPP1Q86YN1 238 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 OR8I2Q8N0Y5 310 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 KIR2DL5AQ8N109 375 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 JKAMPQ9P055 326 aa10.93□□□□□ -0.66
SHMT2-222ENST00000555774 SUMO1P63165 101 aaKnown RBP10.92□□□□□ -0.66
SHMT2-222ENST00000555774 UBE2L3P68036 154 aaKnown RBP10.92□□□□□ -0.66
SHMT2-222ENST00000555774 BSPH1Q075Z2 132 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 VMA21Q3ZAQ7 101 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 ST6GALNAC6Q969X2 333 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 TMEM106BQ9NUM4 274 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 KAAG1Q9UBP8 84 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 CDC42EP3Q9UKI2 254 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 A0A1B0GUS0 222 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 TCRBV4S1A1TA0A5B7 111 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 GRIFINA4D1Z8 144 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 IGLV2-8P01709 118 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 THBDP07204 575 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 MC5RP33032 325 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 TDGF1P3P51864 188 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 MLANAQ16655 118 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 OR2T6Q8NHC8 308 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 WFIKKN1Q96NZ8 548 aa10.92□□□□□ -0.66
SHMT2-222ENST00000555774 SMIM27A0A1W2PRY6 76 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 IGLV2-23P01705 113 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 LINC00310P59036 64 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 OR10J3Q5JRS4 329 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 IBA57Q5T440 356 aaKnown RBP10.91□□□□□ -0.66
SHMT2-222ENST00000555774 OR5AU1Q8NGC0 362 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 POLR3KQ9Y2Y1 108 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-222ENST00000555774 KLK10O43240 276 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 FCN3O75636 299 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 SERF1AO75920 110 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 DYSFO75923 2080 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 AMY1AP04745 511 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 DLX6P56179 175 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 WT1-ASQ06250 92 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 C10orf113Q5VZT2 155 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 ETFRF1Q6IPR1 90 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 BAGE3Q86Y29 109 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 BAGE2Q86Y30 109 aa10.91□□□□□ -0.66
SHMT2-222ENST00000555774 H1FXQ92522 213 aaKnown RBP10.91□□□□□ -0.66
SHMT2-222ENST00000555774 A0A1B0GV90 55 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 CGB1A6NKQ9 187 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 COL8A2P25067 703 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 LGALS7P47929 136 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 PVRIGQ6DKI7 326 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 RASL11AQ6T310 242 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 TMEM136Q6ZRR5 245 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 FAM231DQ6ZW35 169 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 TGIF2LXQ8IUE1 241 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 ST6GALNAC3Q8NDV1 305 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 PAXXQ9BUH6 204 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 RNASE7Q9H1E1 156 aaKnown RBP10.9□□□□□ -0.66
SHMT2-222ENST00000555774 OTOGLQ3ZCN5 2332 aa10.9□□□□□ -0.66
SHMT2-222ENST00000555774 REG1BP48304 166 aa10.9□□□□□ -0.67
SHMT2-222ENST00000555774 TMEM155Q4W5P6 130 aa10.9□□□□□ -0.67
SHMT2-222ENST00000555774 STXBP6Q8NFX7 210 aa10.9□□□□□ -0.67
SHMT2-222ENST00000555774 ZNF355PQ9NSJ1 428 aa10.9□□□□□ -0.67
SHMT2-222ENST00000555774 NAT8BQ9UHF3 227 aa10.9□□□□□ -0.67
SHMT2-222ENST00000555774 E7EUB6 86 aa10.89□□□□□ -0.67
SHMT2-222ENST00000555774 LOXP28300 417 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms