RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 TMEM230Q96A57 120 aa11.34□□□□□ -0.59
IFT43-211ENST00000555677 NEURL2Q9BR09 285 aa11.34□□□□□ -0.59
IFT43-211ENST00000555677 PDCD10Q9BUL8 212 aa11.34□□□□□ -0.59
IFT43-211ENST00000555677 MCUBQ9NWR8 336 aa11.34□□□□□ -0.59
IFT43-211ENST00000555677 UFC1Q9Y3C8 167 aa11.34□□□□□ -0.59
IFT43-211ENST00000555677 V9GYH0 126 aa11.34□□□□□ -0.59
IFT43-211ENST00000555677 ZNF701M0R085 212 aaPredicted RBP11.33□□□□□ -0.6
IFT43-211ENST00000555677 NDUFA4O00483 81 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 MT-CO2P00403 227 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 IGHV3-48P01763 117 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 S100A5P33763 92 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 SNCAP37840 140 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 MFAP4P55083 255 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 ZNF79Q15937 498 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 BTNL8Q6UX41 500 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 FAM219AQ8IW50 185 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 TMEM61Q8N0U2 210 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 SLC35G3Q8N808 338 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 RNASE11Q8TAA1 199 aaKnown RBP11.33□□□□□ -0.6
IFT43-211ENST00000555677 TMEM190Q8WZ59 177 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 RBPMSQ93062 196 aaKnown RBP11.33□□□□□ -0.6
IFT43-211ENST00000555677 MARC2Q969Z3 335 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 PINX1Q96BK5 328 aaKnown RBP11.33□□□□□ -0.6
IFT43-211ENST00000555677 ZNF414Q96IQ9 312 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 RCHY1Q96PM5 261 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 TXN2Q99757 166 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 TM2D3Q9BRN9 247 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 TUBA4BQ9H853 241 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 ZMAT4Q9H898 229 aa11.33□□□□□ -0.6
IFT43-211ENST00000555677 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
IFT43-211ENST00000555677 KLF9Q13886 244 aaPredicted RBP11.32□□□□□ -0.6
IFT43-211ENST00000555677 TMEM268Q5VZI3 342 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 CCDC190Q86UF4 302 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 TOMM5Q8N4H5 51 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 TRIM63Q969Q1 353 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 GPR146Q96CH1 333 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 SCGB3A2Q96PL1 93 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
IFT43-211ENST00000555677 GAR1Q9NY12 217 aaKnown RBP11.32□□□□□ -0.6
IFT43-211ENST00000555677 KCNIP3Q9Y2W7 256 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 TMEM56-RWDD3S4R434 201 aa11.32□□□□□ -0.6
IFT43-211ENST00000555677 IGHV3OR16-8A0A075B7F1 116 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 OR11H12B2RN74 326 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 NUPL2O15504 423 aaKnown RBP11.31□□□□□ -0.6
IFT43-211ENST00000555677 SCAF4O95104 1147 aaKnown RBP11.31□□□□□ -0.6
IFT43-211ENST00000555677 RNASE2P10153 161 aaKnown RBP11.31□□□□□ -0.6
IFT43-211ENST00000555677 AKR1C4P17516 323 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
IFT43-211ENST00000555677 TMEM187Q14656 261 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 HAGHQ16775 308 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 LINC00322Q6ZN03 302 aaPredicted RBP11.31□□□□□ -0.6
IFT43-211ENST00000555677 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 GALNT14Q96FL9 552 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 C20orf24Q9BUV8 137 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
IFT43-211ENST00000555677 PRR13Q9NZ81 148 aa11.31□□□□□ -0.6
IFT43-211ENST00000555677 TRAV25A0A0B4J276 109 aa11.3□□□□□ -0.6
IFT43-211ENST00000555677 K7EMT4 169 aa11.3□□□□□ -0.6
IFT43-211ENST00000555677 SPCS3P61009 180 aa11.3□□□□□ -0.6
IFT43-211ENST00000555677 SUPT4H1P63272 117 aaKnown RBP11.3□□□□□ -0.6
IFT43-211ENST00000555677 OR52E5Q8NH55 327 aa11.3□□□□□ -0.6
IFT43-211ENST00000555677 WFDC10AQ9H1F0 79 aa11.3□□□□□ -0.6
IFT43-211ENST00000555677 ENY2Q9NPA8 101 aa11.3□□□□□ -0.6
IFT43-211ENST00000555677 CACNG5Q9UF02 275 aa11.3□□□□□ -0.6
IFT43-211ENST00000555677 TENM3Q9P273 2699 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 C15orf62A8K5M9 175 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 ZNF207O43670 478 aaKnown RBP11.29□□□□□ -0.6
IFT43-211ENST00000555677 GNG7O60262 68 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 FAUP35544 74 aaKnown RBP11.29□□□□□ -0.6
IFT43-211ENST00000555677 HOXA1P49639 335 aaPredicted RBP11.29□□□□□ -0.6
IFT43-211ENST00000555677 AP3S2P59780 193 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 RELQ04864 619 aaPredicted RBP11.29□□□□□ -0.6
IFT43-211ENST00000555677 MLANAQ16655 118 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 BSXQ3C1V8 233 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 RBPMS2Q6ZRY4 209 aaKnown RBP11.29□□□□□ -0.6
IFT43-211ENST00000555677 DUSP18Q8NEJ0 188 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 OR52B4Q8NGK2 314 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 IL22RA2Q969J5 263 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 OR10C1Q96KK4 312 aa11.29□□□□□ -0.6
IFT43-211ENST00000555677 HUWE1Q7Z6Z7 4374 aaKnown RBP11.29□□□□□ -0.6
IFT43-211ENST00000555677 RBMY1BA6NDE4 496 aaKnown RBP11.28□□□□□ -0.6
IFT43-211ENST00000555677 RBMY1EA6NEQ0 496 aaKnown RBP11.28□□□□□ -0.6
IFT43-211ENST00000555677 TMEM50AO95807 157 aa11.28□□□□□ -0.6
IFT43-211ENST00000555677 RBMY1DP0C7P1 496 aaKnown RBP11.28□□□□□ -0.6
IFT43-211ENST00000555677 ANKRD55Q3KP44 614 aa11.28□□□□□ -0.6
IFT43-211ENST00000555677 SLC16A13Q7RTY0 426 aa11.28□□□□□ -0.6
IFT43-211ENST00000555677 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
IFT43-211ENST00000555677 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
IFT43-211ENST00000555677 NBEAL2Q6ZNJ1 2754 aa11.28□□□□□ -0.6
IFT43-211ENST00000555677 CORTO00230 105 aa11.27□□□□□ -0.61
IFT43-211ENST00000555677 YIF1AO95070 293 aa11.27□□□□□ -0.61
IFT43-211ENST00000555677 NPBWR1P48145 328 aa11.27□□□□□ -0.61
IFT43-211ENST00000555677 SPANXN2Q5MJ10 180 aa11.27□□□□□ -0.61
IFT43-211ENST00000555677 LYZL2Q7Z4W2 148 aa11.27□□□□□ -0.61
IFT43-211ENST00000555677 DEDD2Q8WXF8 326 aa11.27□□□□□ -0.61
IFT43-211ENST00000555677 HEYLQ9NQ87 328 aaPredicted RBP11.27□□□□□ -0.61
IFT43-211ENST00000555677 SMPXQ9UHP9 88 aa11.27□□□□□ -0.61
IFT43-211ENST00000555677 TRAV14DV4A0A0A6YYC5 116 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms