RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RASL11AQ6T310 242 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 TEX43Q6ZNM6 134 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 BAGE3Q86Y29 109 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 BAGE2Q86Y30 109 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 LINC00311Q8N616 119 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 OR5AU1Q8NGC0 362 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 IGKV1OR2-108A0A075B7D4 117 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 ZNF705FA8MVS1 300 aaPredicted RBP13.16□□□□□ -0.3
TUBB3-209ENST00000555609 IGKV1-16P04430 117 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 ZNF705DP0CH99 300 aaPredicted RBP13.16□□□□□ -0.3
TUBB3-209ENST00000555609 ZNF705BP0CI00 300 aaPredicted RBP13.16□□□□□ -0.3
TUBB3-209ENST00000555609 MYOD1P15172 320 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 NDUFB7P17568 137 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 RPL8P62917 257 aaKnown RBP13.16□□□□□ -0.3
TUBB3-209ENST00000555609 ALKBH2Q6NS38 261 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 DUX4L9Q6RFH8 374 aaPredicted RBP13.16□□□□□ -0.3
TUBB3-209ENST00000555609 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 FAM216BQ8N7L0 139 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 DEFB108BQ8NET1 73 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 TMEM167AQ8TBQ9 72 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 ZNF596Q8TC21 504 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 TBX15Q96SF7 602 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 CDC42EP3Q9UKI2 254 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 HEATR1Q9H583 2144 aaKnown RBP13.15□□□□□ -0.3
TUBB3-209ENST00000555609 SMIM27A0A1W2PRY6 76 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 H0YJW9 148 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 MMP23AO75900 390 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 SERF1AO75920 110 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 HLA-DQA1P01909 254 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 REG1AP05451 166 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
TUBB3-209ENST00000555609 PDPNQ86YL7 162 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 FLYWCH2Q96CP2 140 aaKnown RBP13.15□□□□□ -0.3
TUBB3-209ENST00000555609 IGF2BP2-AS1Q96M15 143 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 CHRDL1Q9BU40 450 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 CEP295Q9C0D2 2601 aa13.15□□□□□ -0.3
TUBB3-209ENST00000555609 DSCAML1Q8TD84 2053 aa13.15□□□□□ -0.31
TUBB3-209ENST00000555609 CELSR3Q9NYQ7 3312 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 GRIFINA4D1Z8 144 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 PSMB11A5LHX3 300 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 AMY1AP04745 511 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 BRS3P32247 399 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 LINC00310P59036 64 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 OR5I1Q13606 314 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 TMEM108Q6UXF1 575 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 FAM231DQ6ZW35 169 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 Q6ZWC4 215 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 TMEM186Q96B77 213 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 HARBI1Q96MB7 349 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 INTS1Q8N201 2190 aaKnown RBP13.14□□□□□ -0.31
TUBB3-209ENST00000555609 CACNA1AO00555 2505 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 AKAP13Q12802 2813 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 SNRPCP09234 159 aaKnown RBP13.14□□□□□ -0.31
TUBB3-209ENST00000555609 RNF224P0DH78 156 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 RAB4AP20338 218 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 SUMO1P63165 101 aaKnown RBP13.14□□□□□ -0.31
TUBB3-209ENST00000555609 TMEM136Q6ZRR5 245 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 OR4C13Q8NGP0 309 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 FAM57AQ8TBR7 257 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 FAM167A-AS1Q96KT0 104 aa13.14□□□□□ -0.31
TUBB3-209ENST00000555609 RBM14Q96PK6 669 aaKnown RBP13.14□□□□□ -0.31
TUBB3-209ENST00000555609 TANC2Q9HCD6 1990 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 IGLV2-8P01709 118 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 BPIFB3P59826 476 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 TMEM183BQ1AE95 376 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 IBA57Q5T440 356 aaKnown RBP13.13□□□□□ -0.31
TUBB3-209ENST00000555609 TPTE2P1Q5T6R2 138 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 SIGLECL1Q8N7X8 197 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 THAP8Q8NA92 274 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 ST6GALNAC3Q8NDV1 305 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 WIPF2Q8TF74 440 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-209ENST00000555609 WFIKKN1Q96NZ8 548 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 MRPL20Q9BYC9 149 aaKnown RBP13.13□□□□□ -0.31
TUBB3-209ENST00000555609 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 ZNF430Q9H8G1 570 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-209ENST00000555609 NAT8BQ9UHF3 227 aa13.13□□□□□ -0.31
TUBB3-209ENST00000555609 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 OR9G1Q8NH87 305 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 HSPB9Q9BQS6 159 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 SLC25A2Q9BXI2 301 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 DSCAMO60469 2012 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 FRYQ5TBA9 3013 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 C17orf100A8MU93 164 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 MOB3BQ86TA1 216 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 DOLPP1Q86YN1 238 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 STXBP6Q8NFX7 210 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 SMIM12Q96EX1 92 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 ZNF586Q9NXT0 402 aa13.12□□□□□ -0.31
TUBB3-209ENST00000555609 TCRBV4S1A1TA0A5B7 111 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 VSTM5A8MXK1 200 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 COX7A2P2O60397 106 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 GPX1P07203 203 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 ZNF137PP52743 207 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 UBE2L3P68036 154 aaKnown RBP13.11□□□□□ -0.31
TUBB3-209ENST00000555609 FAM27E3Q08E93 113 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 ETFRF1Q6IPR1 90 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms