RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ADMP35318 185 aa18.31■□□□□ 0.52
PRKCH-216ENST00000555542 SNCAP37840 140 aa18.31■□□□□ 0.52
PRKCH-216ENST00000555542 FAAP20Q6NZ36 180 aa18.31■□□□□ 0.52
PRKCH-216ENST00000555542 RRNAD1Q96FB5 475 aaKnown RBP18.31■□□□□ 0.52
PRKCH-216ENST00000555542 SPAG8Q99932 426 aaPredicted RBP18.31■□□□□ 0.52
PRKCH-216ENST00000555542 DISC1C4P0D8 188 aa18.3■□□□□ 0.52
PRKCH-216ENST00000555542 I3L2K1 104 aa18.3■□□□□ 0.52
PRKCH-216ENST00000555542 IGHV3-48P01763 117 aa18.3■□□□□ 0.52
PRKCH-216ENST00000555542 CTSDP07339 412 aaPredicted RBP18.3■□□□□ 0.52
PRKCH-216ENST00000555542 C6orf62Q9GZU0 229 aaPredicted RBP18.3■□□□□ 0.52
PRKCH-216ENST00000555542 ENY2Q9NPA8 101 aa18.3■□□□□ 0.52
PRKCH-216ENST00000555542 CCDC59Q9P031 241 aaKnown RBP18.3■□□□□ 0.52
PRKCH-216ENST00000555542 K7EMT4 169 aa18.29■□□□□ 0.52
PRKCH-216ENST00000555542 ST8SIA3O43173 380 aa18.29■□□□□ 0.52
PRKCH-216ENST00000555542 GNG7O60262 68 aa18.29■□□□□ 0.52
PRKCH-216ENST00000555542 CTSGP08311 255 aa18.29■□□□□ 0.52
PRKCH-216ENST00000555542 HOXA1P49639 335 aaPredicted RBP18.29■□□□□ 0.52
PRKCH-216ENST00000555542 TMBIM6P55061 237 aa18.29■□□□□ 0.52
PRKCH-216ENST00000555542 SMIM4Q8WVI0 70 aa18.29■□□□□ 0.52
PRKCH-216ENST00000555542 TXN2Q99757 166 aa18.29■□□□□ 0.52
PRKCH-216ENST00000555542 GGTLC1Q9BX51 225 aa18.29■□□□□ 0.52
PRKCH-216ENST00000555542 LOC102724200A0A096LPH7 203 aaPredicted RBP18.28■□□□□ 0.52
PRKCH-216ENST00000555542 TEX13DA0A0J9YY54 714 aaPredicted RBP18.28■□□□□ 0.52
PRKCH-216ENST00000555542 C15orf62A8K5M9 175 aa18.28■□□□□ 0.52
PRKCH-216ENST00000555542 TSPAN4O14817 238 aa18.28■□□□□ 0.52
PRKCH-216ENST00000555542 B3GALNT1O75752 331 aa18.28■□□□□ 0.52
PRKCH-216ENST00000555542 BCL7BQ9BQE9 202 aa18.28■□□□□ 0.52
PRKCH-216ENST00000555542 RABL2AQ9UBK7 228 aaPredicted RBP18.28■□□□□ 0.52
PRKCH-216ENST00000555542 UBQLN2Q9UHD9 624 aa18.28■□□□□ 0.52
PRKCH-216ENST00000555542 RABL2BQ9UNT1 228 aa18.28■□□□□ 0.52
PRKCH-216ENST00000555542 A0A0B4J293 547 aa18.27■□□□□ 0.52
PRKCH-216ENST00000555542 AKAIN1P0CW23 69 aa18.27■□□□□ 0.52
PRKCH-216ENST00000555542 UCP1P25874 307 aa18.27■□□□□ 0.52
PRKCH-216ENST00000555542 SUB1P53999 127 aaKnown RBP eCLIP18.27■□□□□ 0.52
PRKCH-216ENST00000555542 DYNC2LI1Q8TCX1 351 aa18.27■□□□□ 0.52
PRKCH-216ENST00000555542 DNAH7Q8WXX0 4024 aa18.27■□□□□ 0.51
PRKCH-216ENST00000555542 OR5AC1P0C628 307 aa18.26■□□□□ 0.51
PRKCH-216ENST00000555542 FCGR2BP31994 310 aaPredicted RBP18.26■□□□□ 0.51
PRKCH-216ENST00000555542 ETV6P41212 452 aa18.26■□□□□ 0.51
PRKCH-216ENST00000555542 DUSP18Q8NEJ0 188 aa18.26■□□□□ 0.51
PRKCH-216ENST00000555542 OR4C46A6NHA9 309 aa18.25■□□□□ 0.51
PRKCH-216ENST00000555542 CTDSPLO15194 276 aa18.25■□□□□ 0.51
PRKCH-216ENST00000555542 P0C879 139 aa18.25■□□□□ 0.51
PRKCH-216ENST00000555542 TMEM116Q8NCL8 245 aa18.25■□□□□ 0.51
PRKCH-216ENST00000555542 OR4C16Q8NGL9 310 aa18.25■□□□□ 0.51
PRKCH-216ENST00000555542 NXF2Q9GZY0 626 aaKnown RBP18.25■□□□□ 0.51
PRKCH-216ENST00000555542 IGHV3-49A0A0A0MS15 119 aa18.24■□□□□ 0.51
PRKCH-216ENST00000555542 IGHV7-4-1A0A0J9YVY3 117 aa18.24■□□□□ 0.51
PRKCH-216ENST00000555542 CORTO00230 105 aa18.24■□□□□ 0.51
PRKCH-216ENST00000555542 RPL5P46777 297 aaKnown RBP18.24■□□□□ 0.51
PRKCH-216ENST00000555542 NPBWR1P48145 328 aa18.24■□□□□ 0.51
PRKCH-216ENST00000555542 SURF2Q15527 256 aaPredicted RBP18.24■□□□□ 0.51
PRKCH-216ENST00000555542 PRRT1Q99946 306 aa18.24■□□□□ 0.51
PRKCH-216ENST00000555542 TMEM222Q9H0R3 208 aa18.24■□□□□ 0.51
PRKCH-216ENST00000555542 NAA60Q9H7X0 242 aa18.24■□□□□ 0.51
PRKCH-216ENST00000555542 SMPXQ9UHP9 88 aa18.24■□□□□ 0.51
PRKCH-216ENST00000555542 RYR3Q15413 4870 aa18.23■□□□□ 0.51
PRKCH-216ENST00000555542 IL17DQ8TAD2 202 aa18.23■□□□□ 0.51
PRKCH-216ENST00000555542 GINS3Q9BRX5 216 aa18.23■□□□□ 0.51
PRKCH-216ENST00000555542 RTBDNQ9BSG5 229 aaPredicted RBP18.23■□□□□ 0.51
PRKCH-216ENST00000555542 RHPN1-AS1Q9BWJ2 59 aa18.23■□□□□ 0.51
PRKCH-216ENST00000555542 RSL24D1Q9UHA3 163 aaKnown RBP18.23■□□□□ 0.51
PRKCH-216ENST00000555542 TRAV14DV4A0A0A6YYC5 116 aa18.22■□□□□ 0.51
PRKCH-216ENST00000555542 A0A0G2JRQ6 117 aa18.22■□□□□ 0.51
PRKCH-216ENST00000555542 INS-IGF2F8WCM5 200 aa18.22■□□□□ 0.51
PRKCH-216ENST00000555542 DHODHQ02127 395 aa18.22■□□□□ 0.51
PRKCH-216ENST00000555542 FAM219AQ8IW50 185 aa18.22■□□□□ 0.51
PRKCH-216ENST00000555542 OR51S1Q8NGJ8 323 aa18.22■□□□□ 0.51
PRKCH-216ENST00000555542 RBPMSQ93062 196 aaKnown RBP18.22■□□□□ 0.51
PRKCH-216ENST00000555542 OR10C1Q96KK4 312 aa18.22■□□□□ 0.51
PRKCH-216ENST00000555542 RNF2Q99496 336 aa18.22■□□□□ 0.51
PRKCH-216ENST00000555542 IGKV3-7A0A075B6H7 116 aa18.21■□□□□ 0.51
PRKCH-216ENST00000555542 H3BMQ9 156 aa18.21■□□□□ 0.51
PRKCH-216ENST00000555542 CHEK1O14757 476 aa18.21■□□□□ 0.51
PRKCH-216ENST00000555542 CDS2O95674 445 aa18.21■□□□□ 0.51
PRKCH-216ENST00000555542 RNASE2P10153 161 aaKnown RBP18.21■□□□□ 0.51
PRKCH-216ENST00000555542 BMI1P35226 326 aa18.21■□□□□ 0.51
PRKCH-216ENST00000555542 OPRK1P41145 380 aa18.21■□□□□ 0.51
PRKCH-216ENST00000555542 APOC4P55056 127 aa18.21■□□□□ 0.51
PRKCH-216ENST00000555542 MCUBQ9NWR8 336 aa18.21■□□□□ 0.51
PRKCH-216ENST00000555542 IGHV3OR16-13A0A075B7E8 117 aa18.2■□□□□ 0.5
PRKCH-216ENST00000555542 IGHV3-74A0A0B4J1X5 117 aa18.2■□□□□ 0.5
PRKCH-216ENST00000555542 TFPI2P48307 235 aa18.2■□□□□ 0.5
PRKCH-216ENST00000555542 TMEM268Q5VZI3 342 aa18.2■□□□□ 0.5
PRKCH-216ENST00000555542 MCFD2Q8NI22 146 aa18.2■□□□□ 0.5
PRKCH-216ENST00000555542 GLYATL2Q8WU03 294 aa18.2■□□□□ 0.5
PRKCH-216ENST00000555542 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.2■□□□□ 0.5
PRKCH-216ENST00000555542 SCP2D1Q9UJQ7 156 aa18.2■□□□□ 0.5
PRKCH-216ENST00000555542 GPR132Q9UNW8 380 aa18.2■□□□□ 0.5
PRKCH-216ENST00000555542 ANKRD20A5PA0PJZ0 165 aa18.19■□□□□ 0.5
PRKCH-216ENST00000555542 FABP12A6NFH5 140 aa18.19■□□□□ 0.5
PRKCH-216ENST00000555542 CRYM-AS1A6NIL9 109 aa18.19■□□□□ 0.5
PRKCH-216ENST00000555542 GSTZ1O43708 216 aaPredicted RBP18.19■□□□□ 0.5
PRKCH-216ENST00000555542 SCGB2A1O75556 95 aa18.19■□□□□ 0.5
PRKCH-216ENST00000555542 SPCS3P61009 180 aa18.19■□□□□ 0.5
PRKCH-216ENST00000555542 ODF3L2Q3SX64 289 aa18.19■□□□□ 0.5
PRKCH-216ENST00000555542 SELENOHQ8IZQ5 122 aaKnown RBP18.19■□□□□ 0.5
PRKCH-216ENST00000555542 LHFPL5Q8TAF8 219 aa18.19■□□□□ 0.5
PRKCH-216ENST00000555542 SLIRPQ9GZT3 109 aaKnown RBP18.19■□□□□ 0.5
PRKCH-216ENST00000555542 CACNG5Q9UF02 275 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms