RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 QRFPP83859 136 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 IFITM2Q01629 132 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 CAV1Q03135 178 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 DEFB113Q30KQ7 82 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 C12orf74Q32Q52 190 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 SPANXN3Q5MJ09 141 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 DNM1P34Q6PK57 102 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 C3orf56Q8N813 242 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 GPR32P1Q8NGA4 272 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 ITFG2Q969R8 447 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 SIKE1Q9BRV8 207 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 TNFSF18Q9UNG2 199 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 RIC1Q4ADV7 1423 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 COL4A5P29400 1685 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 PTPRZ1P23471 2315 aaPredicted RBP-0.31□□□□□ -2.46
SNX6-204ENST00000555541 TINCRA0A1B0GVN0 87 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 TRBV6-4A0A1B0GX49 114 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 FTCDNL1E5RQL4 147 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 F8VZ95 297 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 INMT-MINDY4F8WBC2 141 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 SMLR1H3BR10 107 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 KRT75O95678 551 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 IL3P08700 152 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 UGT2B7P16662 529 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST1H2BOP23527 126 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST1H2BBP33778 126 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST1H2BDP58876 126 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST1H2BCP62807 126 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 PPP1R1AQ13522 171 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 GRK1Q15835 563 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST2H2BEQ16778 126 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST1H2BHQ93079 126 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST1H2BNQ99877 126 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 HIST1H2BMQ99879 126 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 DHRS9Q9BPW9 319 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 DERL1Q9BUN8 251 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 AGPAT3Q9NRZ7 376 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 MED29Q9NX70 200 aa-0.31□□□□□ -2.46
SNX6-204ENST00000555541 ASCC3Q8N3C0 2202 aaKnown RBP-0.32□□□□□ -2.46
SNX6-204ENST00000555541 A0A0J9YY10 115 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 LOC100506127A0A0U1RQW1 187 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 A0A1B0GX78 115 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 TOX3O15405 576 aaPredicted RBP-0.32□□□□□ -2.46
SNX6-204ENST00000555541 OR2B3O76000 313 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 BRI3O95415 125 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 ZNF682O95780 498 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 SPINK1P00995 79 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 CD3DP04234 171 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 COX6A1P12074 109 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 MAP2K4P45985 399 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 MAP3K7CLP57077 242 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 FXYD6P3P58550 94 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 BATFQ16520 125 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 Q3ZCU0 254 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 LINC01554Q52M75 96 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 COQ5Q5HYK3 327 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.32□□□□□ -2.46
SNX6-204ENST00000555541 MIR17HGQ75NE6 70 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 IMP4Q96G21 291 aaKnown RBP-0.32□□□□□ -2.46
SNX6-204ENST00000555541 DIRAS2Q96HU8 199 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 CNBD2Q96M20 576 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 C6orf62Q9GZU0 229 aaPredicted RBP-0.32□□□□□ -2.46
SNX6-204ENST00000555541 MIXL1Q9H2W2 232 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 OR51I2Q9H344 312 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 XPNPEP1Q9NQW7 623 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 C14orf105Q9NVL8 296 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 TAS2R7Q9NYW3 318 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 CHMP5Q9NZZ3 219 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 EPDR1Q9UM22 224 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 SLC35A3Q9Y2D2 325 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 POLR1DQ9Y2S0 133 aa-0.32□□□□□ -2.46
SNX6-204ENST00000555541 TPRP12270 2363 aaKnown RBP-0.33□□□□□ -2.46
SNX6-204ENST00000555541 C5orf67F2Z3F1 127 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 MKRN2OSH3BPM6 223 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 CCL16O15467 120 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 HPGDSO60760 199 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 RSU1Q15404 277 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 GUK1Q16774 197 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 CDKL4Q5MAI5 379 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 RPL22L1Q6P5R6 122 aaKnown RBP-0.33□□□□□ -2.46
SNX6-204ENST00000555541 COPS6Q7L5N1 327 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 COMMD7Q86VX2 200 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 CD302Q8IX05 232 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 OR10J5Q8NHC4 309 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 ZC2HC1AQ96GY0 325 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 WDR61Q9GZS3 305 aaKnown RBP-0.33□□□□□ -2.46
SNX6-204ENST00000555541 C15orf41Q9Y2V0 281 aa-0.33□□□□□ -2.46
SNX6-204ENST00000555541 IGLV3-32A0A0A0MS00 114 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 IGHV1-58A0A0C4DH39 117 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 BIRC5O15392 142 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 NUPR1O60356 82 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 IGKV1-5P01602 117 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 HLA-DRAP01903 254 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 IVLP07476 585 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 FOXA3P55318 350 aaPredicted RBP-0.34□□□□□ -2.46
SNX6-204ENST00000555541 HBA1P69905 142 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 ANGPT1Q15389 498 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 SDHAF4Q5VUM1 108 aa-0.34□□□□□ -2.46
SNX6-204ENST00000555541 HAGHLQ6PII5 290 aaPredicted RBP-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms