RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MAS1LP35410 378 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 G6PCP35575 357 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 BRWD1-AS2P59051 145 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 LINC00205P59089 165 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 CCL20P78556 96 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 SLC38A11Q08AI6 406 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 ARL16Q0P5N6 197 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 ICAM4Q14773 271 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 TMEM41BQ5BJD5 291 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 SPANXN5Q5MJ07 72 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 ST6GALNAC6Q969X2 333 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 S1PR3Q99500 378 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 RARRES2Q99969 163 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 TMEM147Q9BVK8 224 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 BIN3Q9NQY0 253 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 TCF19Q9Y242 345 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 STAB1Q9NY15 2570 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 A0A087WWC5 75 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 LOC102723971A0A1B0GUV8 181 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 A6NDX4 124 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 NCBP2LA6PVI3 153 aaKnown RBP7.87□□□□□ -1.15
PSEN1-213ENST00000555386 OOSP1A8MZH6 123 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 IFNA1P01562 189 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 FAM106CPP0CH98 169 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 OR13C7P0DN81 318 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 DUTP33316 252 aaKnown RBP7.87□□□□□ -1.15
PSEN1-213ENST00000555386 TAGLN2P37802 199 aaKnown RBP7.87□□□□□ -1.15
PSEN1-213ENST00000555386 RAB5BP61020 215 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 ZNF816Q0VGE8 651 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-213ENST00000555386 VWC2Q2TAL6 325 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 PDLIM3Q53GG5 364 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-213ENST00000555386 C9orf152Q5JTZ5 239 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-213ENST00000555386 OR52E5Q8NH55 327 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 DTD1Q8TEA8 209 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 OR4C12Q96R67 309 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 CLCC1Q96S66 551 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 P2RX4Q99571 388 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 SLC25A33Q9BSK2 321 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 PITPNC1Q9UKF7 332 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 PRELID1Q9Y255 219 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 RFNGQ9Y644 331 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 MARCH11A6NNE9 402 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 LINC00473A8K010 186 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 B4DEV8 164 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-213ENST00000555386 RPP30P78346 268 aaKnown RBP7.86□□□□□ -1.15
PSEN1-213ENST00000555386 ZNF833PQ6ZTB9 187 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 SLC35E3Q7Z769 313 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 OR10P1Q8NGE3 313 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 CFHR4Q92496 578 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 HIST1H2BAQ96A08 127 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 R3HDM4Q96D70 268 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 NABP2Q9BQ15 211 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 RSG1Q9BU20 258 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 RPRMQ9NS64 109 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 C1RLQ9NZP8 487 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 SIGLEC9Q9Y336 463 aa7.86□□□□□ -1.15
PSEN1-213ENST00000555386 TENM1Q9UKZ4 2725 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 DNHD1Q96M86 4753 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 A0A1B0GV50 99 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 CXorf65A6NEN9 183 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 PMS2P5A8MQ11 134 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 C1orf196B1AJZ1 125 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 H3BQ15 152 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 IFNA4P05014 189 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 CT45A6P0DMU7 189 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 CT45A5P0DMU8 189 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 CT45A7P0DMV0 189 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 BCL2P10415 239 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 MDKP21741 143 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-213ENST00000555386 ZNF137PP52743 207 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 PNRC1Q12796 327 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-213ENST00000555386 HABP2Q14520 560 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-213ENST00000555386 HAGHQ16775 308 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 OR2B11Q5JQS5 317 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 TVP23CQ96ET8 276 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 RCC1LQ96I51 464 aaKnown RBP7.85□□□□□ -1.15
PSEN1-213ENST00000555386 EAF1Q96JC9 268 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-213ENST00000555386 ZNF251Q9BRH9 671 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 NIPSNAP3BQ9BS92 247 aa7.85□□□□□ -1.15
PSEN1-213ENST00000555386 UBE2L5PA0A1B0GUS4 154 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 CEBPZOSA8MTT3 80 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 C17orf112F2Z3M2 114 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 PROP1O75360 226 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 MOSP00540 346 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 CNTFRP26992 372 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 SPCS3P61009 180 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 ERVK-16P61578 105 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 BLCAPP62952 87 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 AKIRIN2Q53H80 203 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 OR8G2PQ6IF36 304 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 Q6ZS46 218 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 Q6ZSV7 163 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 ZNF429Q86V71 674 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 OR4C13Q8NGP0 309 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 OR2T10Q8NGZ9 312 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 ADTRPQ96IZ2 230 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 RITA1Q96K30 269 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 RBM14Q96PK6 669 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms