RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 FBLN7Q53RD9 439 aa13.96□□□□□ -0.17
PSEN1-212ENST00000555254 HAPLN4Q86UW8 402 aa13.96□□□□□ -0.17
PSEN1-212ENST00000555254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.96□□□□□ -0.17
PSEN1-212ENST00000555254 OR1L6Q8NGR2 347 aa13.96□□□□□ -0.17
PSEN1-212ENST00000555254 SMCO3A2RU48 225 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 PMS2P5A8MQ11 134 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 TEX22C9J3V5 150 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 CFDP00746 253 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-212ENST00000555254 DEFA4P12838 97 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 EXOSC2Q13868 293 aaKnown RBP13.95□□□□□ -0.18
PSEN1-212ENST00000555254 TUSC1Q2TAM9 212 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 Q6YL49 198 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 C5orf56Q8N8D9 126 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 RNASEH2CQ8TDP1 164 aaKnown RBP13.95□□□□□ -0.18
PSEN1-212ENST00000555254 SCARB1Q8WTV0 552 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 GNPNAT1Q96EK6 184 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-212ENST00000555254 GINS3Q9BRX5 216 aa13.95□□□□□ -0.18
PSEN1-212ENST00000555254 A0A1B0GW64 132 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 CORTO00230 105 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 REG1AP05451 166 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 AREGP15514 252 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 GPX4P36969 197 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-212ENST00000555254 IER3P46695 156 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 BSXQ3C1V8 233 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 ETFRF1Q6IPR1 90 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 ALKAL2Q6UX46 152 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 HSD17B11Q8NBQ5 300 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 OR1P1Q8NH06 330 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 P2RX4Q99571 388 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 ARV1Q9H2C2 271 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 PARP11Q9NR21 331 aa13.94□□□□□ -0.18
PSEN1-212ENST00000555254 IGHV7-81A0A0B4J1V7 117 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 RPS10-NUDT3A0A1W2PQS6 291 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 FBXO24O75426 580 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 APELAP0DMC3 54 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 C9orf152Q5JTZ5 239 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 ZNF709Q8N972 641 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 ZNF114Q8NC26 417 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 CACNG8Q8WXS5 425 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 TMEM68Q96MH6 324 aa13.93□□□□□ -0.18
PSEN1-212ENST00000555254 PARD6GQ9BYG4 376 aaPredicted RBP13.93□□□□□ -0.18
PSEN1-212ENST00000555254 UBE2L5PA0A1B0GUS4 154 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 FNDC10F2Z333 226 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 IGHV4-59P01825 116 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 SEC11BP0C7V7 166 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 SSBP2P81877 361 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-212ENST00000555254 RAB31Q13636 194 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 TMEM170AQ8WVE7 144 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 TMED6Q8WW62 240 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 MISP3Q96FF7 219 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 SLC35E1Q96K37 410 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 WNT10AQ9GZT5 417 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 PRDM13Q9H4Q3 707 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 NPVFQ9HCQ7 196 aa13.92□□□□□ -0.18
PSEN1-212ENST00000555254 F11RQ9Y624 299 aaKnown RBP13.92□□□□□ -0.18
PSEN1-212ENST00000555254 NPIPB5A8MRT5 1133 aa13.91□□□□□ -0.18
PSEN1-212ENST00000555254 FGF7P21781 194 aa13.91□□□□□ -0.18
PSEN1-212ENST00000555254 AKR1C1Q04828 323 aa13.91□□□□□ -0.18
PSEN1-212ENST00000555254 VWC2Q2TAL6 325 aa13.91□□□□□ -0.18
PSEN1-212ENST00000555254 LRRC20Q8TCA0 184 aa13.91□□□□□ -0.18
PSEN1-212ENST00000555254 FAM103A1Q9BTL3 118 aaKnown RBP13.91□□□□□ -0.18
PSEN1-212ENST00000555254 WDR61Q9GZS3 305 aaKnown RBP13.91□□□□□ -0.18
PSEN1-212ENST00000555254 C17orf112F2Z3M2 114 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 MPDU1O75352 247 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 RNASE1P07998 156 aaKnown RBP13.9□□□□□ -0.18
PSEN1-212ENST00000555254 CTRB1P17538 263 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 ATP6V0CP27449 155 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 OPRK1P41145 380 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 CD69Q07108 199 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 UNQ5815/PRO19632Q6UWF5 114 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 BTNL8Q6UX41 500 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 TTC9CQ8N5M4 171 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 LFNGQ8NES3 379 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 OR2G3Q8NGZ4 309 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 SGMS2Q8NHU3 365 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 TAF15Q92804 592 aaKnown RBP eCLIP13.9□□□□□ -0.18
PSEN1-212ENST00000555254 HSPB9Q9BQS6 159 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 SLC25A32Q9H2D1 315 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 VPREB3Q9UKI3 123 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 TNCP24821 2201 aa13.9□□□□□ -0.18
PSEN1-212ENST00000555254 PRSS46E5RG02 174 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 CLDN34H7C241 214 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 CRYGCP07315 174 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 SPP1P10451 314 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 SLC16A13Q7RTY0 426 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 SLC35E3Q7Z769 313 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 RNF141Q8WVD5 230 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 THYN1Q9P016 225 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 WDR83OSQ9Y284 106 aa13.89□□□□□ -0.19
PSEN1-212ENST00000555254 TET2Q6N021 2002 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-212ENST00000555254 SH2D7A6NKC9 451 aaPredicted RBP13.88□□□□□ -0.19
PSEN1-212ENST00000555254 ATP6V0E1O15342 81 aa13.88□□□□□ -0.19
PSEN1-212ENST00000555254 HIST1H1BP16401 226 aaKnown RBP13.88□□□□□ -0.19
PSEN1-212ENST00000555254 RAB5CP51148 216 aa13.88□□□□□ -0.19
PSEN1-212ENST00000555254 NDPQ00604 133 aa13.88□□□□□ -0.19
PSEN1-212ENST00000555254 ECSCRQ19T08 205 aa13.88□□□□□ -0.19
PSEN1-212ENST00000555254 AKR1C8PQ5T2L2 129 aa13.88□□□□□ -0.19
PSEN1-212ENST00000555254 PVRIGQ6DKI7 326 aa13.88□□□□□ -0.19
PSEN1-212ENST00000555254 TMEM86BQ8N661 226 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms