RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 DMXL1Q9Y485 3027 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 MGAQ8IWI9 3026 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 OR5B21A6NL26 309 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 WISP2O76076 250 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 PSG9Q00887 426 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 TEPPQ6URK8 271 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 SNRNP40Q96DI7 357 aaKnown RBP7.31□□□□□ -1.24
SYNE2-217ENST00000555022 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 TAAR6Q96RI8 345 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 TRAV9-2A0A087WT02 112 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 LOC102723996A0A087X1L8 192 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 HIGD1CA8MV81 97 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 GFRA3O60609 400 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 CX3CL1P78423 397 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 C10orf55Q5SWW7 151 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 PRSS57Q6UWY2 283 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 COLCA1Q6ZS62 124 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 BHLHA15Q7RTS1 189 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-217ENST00000555022 S1PR3Q99500 378 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 SH2D2AQ9NP31 389 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 TNFRSF19Q9NS68 423 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 AKAP6Q13023 2319 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 LOC389332A0A1B0GUA5 103 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 ISLRO14498 428 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 CDKN1BP46527 198 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 ZNF134P52741 427 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 Q0VG73 95 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 OR1C1Q15619 314 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 AARDQ4LEZ3 155 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 MTURNQ8N3F0 131 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 TMEM105Q8N8V8 129 aa7.31□□□□□ -1.24
SYNE2-217ENST00000555022 FLYWCH2Q96CP2 140 aaKnown RBP7.31□□□□□ -1.24
SYNE2-217ENST00000555022 CDX2Q99626 313 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-217ENST00000555022 ADGRG4Q8IZF6 3080 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 IGLC7A0M8Q6 106 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A26D6RGX4 464 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 FKBP2P26885 142 aaKnown RBP7.3□□□□□ -1.24
SYNE2-217ENST00000555022 OPRK1P41145 380 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 SPRNQ5BIV9 151 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 LRRC29Q8WV35 223 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 CHRNA10Q9GZZ6 450 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 TMSB15BA0A087X1C1 80 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 TRAV8-1A0A0A6YYK1 113 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 MT-CO2P00403 227 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 MOSP00540 346 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 ORM2P19652 201 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 SMRP1Q8NCR6 262 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 NUP35Q8NFH5 326 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 OR2Z1Q8NG97 314 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 GNB1LQ9BYB4 327 aa7.3□□□□□ -1.24
SYNE2-217ENST00000555022 IGKV1OR2-108A0A075B7D4 117 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 IGHV2-70DA0A0C4DH43 119 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 FAM214BQ7L5A3 538 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 OR8A1Q8NGG7 326 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 CT55Q8WUE5 264 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 WFDC12Q8WWY7 111 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 NPVFQ9HCQ7 196 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 IL19Q9UHD0 177 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 MPC1Q9Y5U8 109 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 IGHV2-26A0A0B4J1V2 119 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 IGLV3-19P01714 112 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 DUTP33316 252 aaKnown RBP7.29□□□□□ -1.24
SYNE2-217ENST00000555022 RAB31Q13636 194 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 KRTAP27-1Q3LI81 207 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 RIPPLY2Q5TAB7 128 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 WDR73Q6P4I2 378 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 MOB1BQ7L9L4 216 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 OR4F17Q8NGA8 305 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 KCNE4Q8WWG9 221 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 ZNF503Q96F45 646 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 ZPBPQ9BS86 351 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-217ENST00000555022 SPTBN1Q01082 2364 aaKnown RBP7.29□□□□□ -1.24
SYNE2-217ENST00000555022 LY6G6EA0A0G2JKS1 128 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 IGHV1-69-2A0A0G2JMI3 117 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 GNG7O60262 68 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 CRYABP02511 175 aaKnown RBP7.29□□□□□ -1.24
SYNE2-217ENST00000555022 EPHA8P29322 1005 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-217ENST00000555022 RPL24P83731 157 aaKnown RBP7.29□□□□□ -1.24
SYNE2-217ENST00000555022 TRIP6Q15654 476 aaKnown RBP7.29□□□□□ -1.24
SYNE2-217ENST00000555022 TBC1D28Q2M2D7 210 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 DCAF12Q5T6F0 453 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 C1orf185Q5T7R7 199 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 PEAR1Q5VY43 1037 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-217ENST00000555022 PPP1R32Q7Z5V6 425 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 U3KQA8 63 aa7.29□□□□□ -1.24
SYNE2-217ENST00000555022 GAGE12BA1L429 117 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 OOEPA6NGQ2 149 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 H3BUT2 72 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 HLA-DQA1P01909 254 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 NUDT10Q8NFP7 164 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 NUDT11Q96G61 164 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 ABI3Q9P2A4 366 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 SPTA1P02549 2419 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 VWC2LB2RUY7 222 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 HSBP1L1C9JCN9 74 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 K7EP13 123 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 ITGB1BP1O14713 200 aa7.28□□□□□ -1.24
SYNE2-217ENST00000555022 P0C879 139 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms