RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TCF19Q9Y242 345 aa14.02□□□□□ -0.16
SHOX-204ENST00000554971 hADV38S2A0JD32 116 aa14.02□□□□□ -0.17
SHOX-204ENST00000554971 MEF2CQ06413 473 aaPredicted RBP14.02□□□□□ -0.17
SHOX-204ENST00000554971 BSXQ3C1V8 233 aa14.02□□□□□ -0.17
SHOX-204ENST00000554971 ZNF343Q6P1L6 599 aa14.02□□□□□ -0.17
SHOX-204ENST00000554971 C11orf42Q8N5U0 333 aa14.02□□□□□ -0.17
SHOX-204ENST00000554971 TMEM14BQ9NUH8 114 aa14.02□□□□□ -0.17
SHOX-204ENST00000554971 PRNDQ9UKY0 176 aa14.02□□□□□ -0.17
SHOX-204ENST00000554971 ZNF257Q9Y2Q1 563 aa14.02□□□□□ -0.17
SHOX-204ENST00000554971 ATRQ13535 2644 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 ELOA3CA0A087WX78 387 aaPredicted RBP14.01□□□□□ -0.17
SHOX-204ENST00000554971 TGIF2-C20orf24A0A0A6YYL0 155 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 A0A1W2PPV4 95 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 PCP4L1A6NKN8 68 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 DLX1P56177 255 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 ARF6P62330 175 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 TREML4Q6UXN2 200 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 RHOVQ96L33 236 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 PYGO2Q9BRQ0 406 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 ENY2Q9NPA8 101 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 URGCP-MRPS24S4R325 110 aa14.01□□□□□ -0.17
SHOX-204ENST00000554971 SAA2-SAA4A0A096LPE2 208 aa14□□□□□ -0.17
SHOX-204ENST00000554971 F6UZH7 168 aa14□□□□□ -0.17
SHOX-204ENST00000554971 IL6RP08887 468 aaPredicted RBP14□□□□□ -0.17
SHOX-204ENST00000554971 SAA2P0DJI9 122 aaPredicted RBP14□□□□□ -0.17
SHOX-204ENST00000554971 CCL3L1P16619 93 aa14□□□□□ -0.17
SHOX-204ENST00000554971 GATA3P23771 443 aa14□□□□□ -0.17
SHOX-204ENST00000554971 DLX6P56179 175 aa14□□□□□ -0.17
SHOX-204ENST00000554971 RAB31Q13636 194 aa14□□□□□ -0.17
SHOX-204ENST00000554971 OR4F5Q8NH21 305 aa14□□□□□ -0.17
SHOX-204ENST00000554971 NANPQ8TBE9 248 aa14□□□□□ -0.17
SHOX-204ENST00000554971 OR4F4Q96R69 305 aa14□□□□□ -0.17
SHOX-204ENST00000554971 C7orf69Q9H7B7 122 aa14□□□□□ -0.17
SHOX-204ENST00000554971 LINC00312Q9Y6C7 94 aa14□□□□□ -0.17
SHOX-204ENST00000554971 LIPFP07098 398 aa14□□□□□ -0.17
SHOX-204ENST00000554971 S100PP25815 95 aa14□□□□□ -0.17
SHOX-204ENST00000554971 SPINK9Q5DT21 86 aa14□□□□□ -0.17
SHOX-204ENST00000554971 SLC25A48Q6ZT89 311 aaKnown RBP14□□□□□ -0.17
SHOX-204ENST00000554971 SSX9Q7RTT3 188 aa14□□□□□ -0.17
SHOX-204ENST00000554971 BTF3L4Q96K17 158 aa14□□□□□ -0.17
SHOX-204ENST00000554971 SIRPDQ9H106 197 aa14□□□□□ -0.17
SHOX-204ENST00000554971 PARLQ9H300 379 aa14□□□□□ -0.17
SHOX-204ENST00000554971 FKBP11Q9NYL4 201 aa14□□□□□ -0.17
SHOX-204ENST00000554971 LSM4Q9Y4Z0 139 aaKnown RBP14□□□□□ -0.17
SHOX-204ENST00000554971 INAFM1C9JVW0 142 aa13.99□□□□□ -0.17
SHOX-204ENST00000554971 RRHO14718 337 aa13.99□□□□□ -0.17
SHOX-204ENST00000554971 SLC31A2O15432 143 aa13.99□□□□□ -0.17
SHOX-204ENST00000554971 RPL23P62829 140 aaKnown RBP13.99□□□□□ -0.17
SHOX-204ENST00000554971 PRB3Q04118 309 aaPredicted RBP13.99□□□□□ -0.17
SHOX-204ENST00000554971 OR4A47Q6IF82 309 aa13.99□□□□□ -0.17
SHOX-204ENST00000554971 IL17RELQ6ZVW7 336 aa13.99□□□□□ -0.17
SHOX-204ENST00000554971 GAL3ST2Q9H3Q3 398 aa13.99□□□□□ -0.17
SHOX-204ENST00000554971 DOK5Q9P104 306 aa13.99□□□□□ -0.17
SHOX-204ENST00000554971 ONECUT1Q9UBC0 465 aa13.99□□□□□ -0.17
SHOX-204ENST00000554971 PAGE4O60829 102 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 PFN1P07737 140 aaKnown RBP13.98□□□□□ -0.17
SHOX-204ENST00000554971 ADIRFQ15847 76 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 RTL8BQ17RB0 113 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 FAM120AOSQ5T036 256 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 OR5B12Q96R08 314 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 TBX15Q96SF7 602 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 C2CD3Q4AC94 2353 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 C11orf94C9JXX5 98 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 J3QLI3 93 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 CXorf1O96002 111 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 NPY1RP25929 384 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 LYG1Q8N1E2 194 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 ZNF383Q8NA42 475 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 SLC24A4Q8NFF2 622 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
SHOX-204ENST00000554971 H7BYZ3 331 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BKO60814 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 CLN5O75503 358 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BJP06899 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 STAG3L2P0CL84 134 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 STAG3L3P0CL85 134 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BOP23527 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BBP33778 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BDP58876 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BCP62807 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HNF4GQ14541 408 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST2H2BEQ16778 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 KLF17Q5JT82 389 aaPredicted RBP13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.97□□□□□ -0.17
SHOX-204ENST00000554971 TEPPQ6URK8 271 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 TNFRSF14Q92956 283 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BHQ93079 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 RPUSD4Q96CM3 377 aaKnown RBP13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BNQ99877 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 HIST1H2BMQ99879 126 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 SSX3Q99909 188 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 PCGF1Q9BSM1 259 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 GGTLC1Q9BX51 225 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 TMEM160Q9NX00 188 aa13.97□□□□□ -0.17
SHOX-204ENST00000554971 TRAV3A0A0B4J244 114 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 MMP23AO75900 390 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 YIF1AO95070 293 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 TRGC2P03986 189 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 SRP14P37108 136 aaKnown RBP13.96□□□□□ -0.17
SHOX-204ENST00000554971 RPL29P47914 159 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms