RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ZNF702PQ9H963 129 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 SONP18583 2426 aaKnown RBP11.3□□□□□ -0.6
SHOX2-206ENST00000554685 H3BUA1 57 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 BCL2L11O43521 198 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 EIF5AP63241 154 aaKnown RBP11.3□□□□□ -0.6
SHOX2-206ENST00000554685 DLK1P80370 383 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 NHLH2Q02577 135 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 SLC38A11Q08AI6 406 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 ZNF266Q14584 549 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 SLC25A24Q6NUK1 477 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 TMEM217Q8N7C4 229 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 OR2T6Q8NHC8 308 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 CACNG8Q8WXS5 425 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
SHOX2-206ENST00000554685 TNCP24821 2201 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 BORCS7-ASMTA0A0B4J1R7 106 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 LINC01548A6NM66 108 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 BRI3O95415 125 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 GPX4P36969 197 aaPredicted RBP11.29□□□□□ -0.6
SHOX2-206ENST00000554685 SLC35B1P78383 322 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 C19orf54Q5BKX5 351 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 OR5T1Q8NG75 326 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 ATP5SQ99766 215 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 TMEM147Q9BVK8 224 aa11.29□□□□□ -0.6
SHOX2-206ENST00000554685 TET2Q6N021 2002 aaPredicted RBP11.29□□□□□ -0.6
SHOX2-206ENST00000554685 G3V318 75 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 IFNA5P01569 189 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 OPRK1P41145 380 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 CD69Q07108 199 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 OPCMLQ14982 345 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 KLK9Q2XQG4 91 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 SLC35E1Q96K37 410 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 SMIM3Q9BZL3 60 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 ZNF355PQ9NSJ1 428 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 UQCC1Q9NVA1 299 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 KLK9Q9UKQ9 250 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 MXRA5Q9NR99 2828 aa11.28□□□□□ -0.6
SHOX2-206ENST00000554685 IGLV11-55A0A075B6I3 123 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 TMEM89A2RUT3 159 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 PRSS46E5RG02 174 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 JTBO76095 146 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 ARL16Q0P5N6 197 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 CLINT1Q14677 625 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 Q6ZS46 218 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 SLC16A13Q7RTY0 426 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 SLC51BQ86UW2 128 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 HAPLN4Q86UW8 402 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 SLA2Q9H6Q3 261 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 LINC00527Q9UJ94 153 aa11.27□□□□□ -0.61
SHOX2-206ENST00000554685 FAM223BA6NKX1 122 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 NDUFA7O95182 113 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
SHOX2-206ENST00000554685 MFAP2P55001 183 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 Q6ZSV7 163 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 FAM223AQ8IWN6 122 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 COMMD1Q8N668 190 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 NECAP1Q8NC96 275 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 NOL4LQ96MY1 436 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-206ENST00000554685 FANCD2OSQ96PS1 177 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 ZNF471Q9BX82 626 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-206ENST00000554685 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-206ENST00000554685 C16orf95Q9H693 158 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 NPVFQ9HCQ7 196 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 SVEP1Q4LDE5 3571 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 F8P00451 2351 aa11.26□□□□□ -0.61
SHOX2-206ENST00000554685 TRBV9A0A0B4J1U6 114 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 PSMB11A5LHX3 300 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 MPDU1O75352 247 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 MT-CO2P00403 227 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 IGHG4P01861 327 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 TPT1P13693 172 aaKnown RBP11.25□□□□□ -0.61
SHOX2-206ENST00000554685 CFHR3Q02985 330 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 C19orf35Q6ZS72 473 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 UBAC2Q8NBM4 344 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 SCGB1C1Q8TD33 95 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 VN1R17PQ8TDU5 208 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 BSCL2Q96G97 398 aaPredicted RBP11.25□□□□□ -0.61
SHOX2-206ENST00000554685 CXorf58Q96LI9 332 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 FBXL7Q9UJT9 491 aa11.25□□□□□ -0.61
SHOX2-206ENST00000554685 ANK3Q12955 4377 aaKnown RBP11.24□□□□□ -0.61
SHOX2-206ENST00000554685 UBE2L5PA0A1B0GUS4 154 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 I3L2K1 104 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 OR2J3O76001 311 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 IGLV1-40P01703 118 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 PRH1P02810 166 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 RHOGP84095 191 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 RAB31Q13636 194 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 TMEM95Q3KNT9 176 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 TEX38Q6PEX7 206 aa11.24□□□□□ -0.61
SHOX2-206ENST00000554685 TMEM144Q7Z5S9 345 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms