RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 PF4P02776 101 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 PRH1P02810 166 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 OR9G9P0C7N8 305 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 M6PRP20645 277 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 ZNF137PP52743 207 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 SPCS3P61009 180 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 ARL16Q0P5N6 197 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 EBI3Q14213 229 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 SPANXN5Q5MJ07 72 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 C10orf91Q5T1B1 145 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 FAM71F2Q6NXP2 309 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 C10orf99Q6UWK7 81 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 TMEM182Q6ZP80 229 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-214ENST00000554604 ZNF833PQ6ZTB9 187 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 SLC35E3Q7Z769 313 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 ZNF329Q86UD4 541 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 ZNF383Q8NA42 475 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 LFNGQ8NES3 379 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 SCGB1C1Q8TD33 95 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 RBMXL1Q96E39 390 aaKnown RBP9.8□□□□□ -0.84
SHMT2-214ENST00000554604 PSMG3Q9BT73 122 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-214ENST00000554604 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 PMS2P5A8MQ11 134 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 CEBPZOSA8MTT3 80 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 HRASP01112 189 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 CD5P06127 495 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 CD33P20138 364 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 SLC35B1P78383 322 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 TAGLNQ01995 201 aaKnown RBP9.79□□□□□ -0.84
SHMT2-214ENST00000554604 SLC38A11Q08AI6 406 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 ZNF429Q86V71 674 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 PUSL1Q8N0Z8 303 aaKnown RBP9.79□□□□□ -0.84
SHMT2-214ENST00000554604 LILRB2Q8N423 598 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 OR4A16Q8NH70 328 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 NOL4LQ96MY1 436 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-214ENST00000554604 OR4C12Q96R67 309 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 RASL11BQ9BPW5 248 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 AIFM2Q9BRQ8 373 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
SHMT2-214ENST00000554604 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
SHMT2-214ENST00000554604 A0A1B0GW64 132 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 RBMXL2O75526 392 aaKnown RBP9.78□□□□□ -0.84
SHMT2-214ENST00000554604 IGHG2P01859 326 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 SNCAP37840 140 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 ZNF616Q08AN1 781 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 RTL8BQ17RB0 113 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 BEAN1Q3B7T3 259 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 OXLD1Q5BKU9 147 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 SAMD5Q5TGI4 173 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 SLC25A24Q6NUK1 477 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 Q8N6K4 173 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 FAM213BQ8TBF2 198 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 PINX1Q96BK5 328 aaKnown RBP9.78□□□□□ -0.84
SHMT2-214ENST00000554604 NARS2Q96I59 477 aaKnown RBP9.78□□□□□ -0.84
SHMT2-214ENST00000554604 CLCC1Q96S66 551 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 TREM1Q9NP99 234 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 UQCC1Q9NVA1 299 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 LINC00527Q9UJ94 153 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 CARHSP1Q9Y2V2 147 aaKnown RBP9.78□□□□□ -0.84
SHMT2-214ENST00000554604 TIMM9Q9Y5J7 89 aa9.78□□□□□ -0.84
SHMT2-214ENST00000554604 C15orf61A6NNL5 157 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 AP4M1O00189 453 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 APOC3P02656 99 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 IL6RP08887 468 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-214ENST00000554604 CT45A6P0DMU7 189 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 CT45A5P0DMU8 189 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 CT45A7P0DMV0 189 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
SHMT2-214ENST00000554604 SERF2P84101 59 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
SHMT2-214ENST00000554604 RUNX1Q01196 453 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 Q8N9W7 124 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 OR10P1Q8NGE3 313 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 TMEM147Q9BVK8 224 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 SEC11CQ9BY50 192 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 WDR61Q9GZS3 305 aaKnown RBP9.77□□□□□ -0.85
SHMT2-214ENST00000554604 SLC35D1Q9NTN3 355 aa9.77□□□□□ -0.85
SHMT2-214ENST00000554604 FOXA2Q9Y261 457 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-214ENST00000554604 SCO1O75880 301 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 IFNA17P01571 189 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 HBE1P02100 147 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 APOA2P02652 100 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 OR2B8PP59922 312 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 AKR1C1Q04828 323 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 PEA15Q15121 130 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 MMDQ15546 238 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 SSX9Q7RTT3 188 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 RHOVQ96L33 236 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 SCRT1Q9BWW7 348 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 MRPL20Q9BYC9 149 aaKnown RBP9.76□□□□□ -0.85
SHMT2-214ENST00000554604 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 TMEM14BQ9NUH8 114 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 RFNGQ9Y644 331 aa9.76□□□□□ -0.85
SHMT2-214ENST00000554604 TRAV1-1A0A0B4J248 108 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 LINC01548A6NM66 108 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 C15orf62A8K5M9 175 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms